Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00157 ATGGCAGGTGTGGCACCCGAAGGATCACAGTATGATGCCGGTCAGTATGATGCCAAAATGAACGAGTTGTTGTCAACCGATGGACAGGATTTCTTCACTTCATATGATGAGGTTTATGATAGTTTTGATGCAATGGGTCTACAAGAAAACTTATTGAGAGGCATCTATGCATATGGTTTTGAGAAGCCTTCTGCAATCCAACAAAGGGGAATAGTTCCTTTCTGCAAAGGTCTTGATGTGATTCAACAGGCCCAGTCTGGCACTGGAAAGACAGCAACATTTTGTTCTGGAATTTTGCAGCAGCTTGATTACGGGTTGGTCCAGTGTCAGGCTTTGGTTTTGGCACCTACAAGGGAGCTGGCCCAGCAAATAGAGAAAGTTATGCGTGCCCTTGGTGACTATCTAGGTGTGAAGGTTCATGCCTGTGTCGGTGGGACAAGCGTCCGCGATGATCAACGCATTCTTCAAGCTGGTGTTCATGTAGTCGTTGGTACCCCTGGTCGTGTATTTGATATGTTAAGGAGGAAGTCCCTTAGATCTGATTACATCAAGATGTTTGTACTGGACGAAGCTGATGAAATGCTTTCTCGTGGTTTCAAGGACCAGGTCCGTCCATCTACTCTCAAATTTGTTTTAATCTCTATTCATCCCCAAGGAGGTGAATGGGTTGATTCCTTTATGAGTGATAGAGATGTTGCAACATCCCAGCTCAAGATTATCATTGATTGA 729 0.4458 MAGVAPEGSQYDAGQYDAKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRDDQRILQAGVHVVVGTPGRVFDMLRRKSLRSDYIKMFVLDEADEMLSRGFKDQVRPSTLKFVLISIHPQGGEWVDSFMSDRDVATSQLKIIID* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00157 242 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 40 68 IPR014014 GO:0003724
Pte19g00157 242 SMART ultradead3 59 240 IPR014001 -
Pte19g00157 242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 205 IPR027417 -
Pte19g00157 242 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 71 235 IPR014001 -
Pte19g00157 242 PANTHER RNA HELICASE 30 205 - -
Pte19g00157 242 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 187 195 IPR000629 -
Pte19g00157 242 Gene3D - 15 217 IPR027417 -
Pte19g00157 242 Pfam DEAD/DEAH box helicase 65 204 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00157 Pte-Chr19 1210436 1211533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00157 1 228 Eukaryotic Initiation Factors Gene Family AT3G13920 78.481 2.60e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00157 K03257 - zju:107425262 393.275