Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00153 ATGAACGGTAACTGGTTGAAGGAGCCGAATGTTGATGTTCTTTTGTTGGTTTTCCGTGTATTAGCCATTTGCCAAACTGCTATTCTTGACTTGAATGAGGAGAATGGTACTCTTACATATGAAGCAGAGTCACCTGATGAGGCGGCTTTTCTTATAGCTGCTAGGAAATTTAGTTTTCAGTTCTGTAAAAGCACTCAATCAAGTGTTTCAATTGAAAGGGAATACAAAATTCTGAAGCTTTTAGATTTTCTTAGCAAAAGAAAGCGAATCTCAGCAATTGTGCGTGACGAAGAGGAGCAGATTTTTCTGTTGTGCCAAGGTGCTGACAGCATTATCTTTGATCGATTGGCAAAGAATGGAAGAATGTTTCTGGAAGCAACAACTAAACATCTGAATGAATATGGGGAAGCTGGTTTGTGCACACTAGCTCTTGATTATAAAAAACTTGAAGAGCAAGAATATAATTCTTGGAACAATGAATCCCAGAAAGCCAAAATGGCAATTGGCTCTGACCGGGAGGCAATGCTCGAGCCTTGA 537 0.3966 MNGNWLKEPNVDVLLLVFRVLAICQTAILDLNEENGTLTYEAESPDEAAFLIAARKFSFQFCKSTQSSVSIEREYKILKLLDFLSKRKRISAIVRDEEEQIFLLCQGADSIIFDRLAKNGRMFLEATTKHLNEYGEAGLCTLALDYKKLEEQEYNSWNNESQKAKMAIGSDREAMLEP* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00153 178 Pfam Cation transport ATPase (P-type) 24 116 - -
Pte19g00153 178 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 11 177 - -
Pte19g00153 178 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 2 152 IPR023299 GO:0000166
Pte19g00153 178 Gene3D - 1 171 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00153 Pte-Chr19 1201924 1202707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00153 1 177 Primary Pumps ATPases AT1G17500 65.957 1.01e-79 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00153 K01530 - csav:115707009 268.855