Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00138 ATGAGTAAAGAGCAAATGAAACGAGGAAACCTAGAGAAGGGATCAGAAGGCGCTGAGAAGGTTGTAGTTGCTGTTAAGGCGTCAAAGGAGATTCCAAAGACTGCTCTTGTGTGGGCTTTAACTCATGTTGTTCAACCAGGTGATTGCATTACACTGCTGGTTGTAGTCCCATCTCAAAGTTCAGGTAGAAAGTGGGGTTTTCCGAGATTTGCTGGGGACTGTGCTAGTGGTTACAAAAAGTCTCATTCCGCAGCAACTTCAGAGCAGAAGTGTGATATCACAGATTCTTGTTCTCAAATGATCCTTCAGCTTCATGATGTTTATGATGAAAATAAGATCAATGTCAATATAAAAATTGTCTCAGGTTCACCTTGTGGATCTGTTGCTGTAGAGGCCAAGAAAGGTCAAGCCAGTTGGGTTGTATTAGACAAACAACTCAGAAATGAAGAAAAACAGTGTATGGAAGAGCTGCAGTGCAATATTGTGGTTATGAAGCGATCCCAGCCTAAGGTTTTACGTCTGAATCTAGTTGGATCATCCAAGAGGGATTTAGAAACAGGTCCCTTACCCCTTGATCAGGAGGAGACATCTGGAAAACAGACCAAAAAGAAAAATGATTCGTCAGATTGTGTAAAAGTACCAGCTGTTACCCCATCAAGTAGTCCTGAATCAGGGACAGCATTCACTACAACTGAAGCTGGTACTTCGTCGGTGTCAAGCTCAGACCCAGGAACTTCACCATTTTTTATCTCAGAGATGAATGCTGACTTAAAGAAAGAGGAAGCTATACAGGAAAACAATGACCATGATGATACAAATTCAGATACCGACAGTGAAAACCTATCTGCATCTTCAGCAAGCTTGAGATTCCAGCCCTGGGTTGCAGAGTTAGTTTCAGAGCAGTCTTCCTTGCTAAAGATTAAAGAAAAGTTTGAGAGATTTGATGACAAGTCCTCGGCATCTAGGACCAAGGGTATTCTAGACAAGTTCTCCAGTGTTGACAGGGATGCTGGAAATGGAACTAGCGGTAGAGTGGAAGTCGATTTTAGTGGCAACTTAAGAGAGGCTATATCTTTATCAAGAAACGCACCTCCTGGCCCGCCTCCCCTGTGCTCAATATGTCAGCATAAGGCACCTGTCTTTGGTAAACCTCCTCAATGGTTCACCTATGCCGAGTTGGAGTTTGCAACTGGTGGTTTTTCTCAAGTGAATTTCTTAGCAGAAGGAGGATTTGGATCGGTTCACAGAGGGGTCTTACCTGATGGTCAAGTAGTTGCTGTGAAGCAACATAAGTTGGCTAGTTCACAAGGGGATCTTGAGTTTTGTTCAGAAGTGGAAGTTTTAAGCTGTGCTCAACACAGAAATGTTGTCATGTTGATTGGATTCTGTATCGAGGATGGTAGAAGATTACTTGTTTATGAATATATTTGCAATGGTTCACTGGATTCACATCTATATGGACGTTATCAGCAGCCACTGGAGTGGTCTGCACGTCAAAAAATTGCAGTTGGAGCTGCTAGAGGGCTGCGATATCTTCATGAGGAATGCAGAGTGGGTTGCATTGTACATAGGGACATGCGGCCAAATAACATTCTTATCACCCATGATTTTGAGCCATTGGTTGGTGATTTTGGCTTGGCAAGGTGGCAACCAGATGGAGATACGGGAGTGGAAACTAGAGTAATTGGAACATTTGGGTATTTGGCCCCAGAATATGCTCAGAGTGGCCAAATTACTGAAAAAGCTGATGTTTATTCATTTGGTGTGGTATTGGTTGAACTTGTCACCGGAAGGAAAGCGGTTGATCTCAACCGTCCCAAGGGCCAGCAGTGTCTTACTGAGTGGGCACGTCCTCTGTTAGAAGAATATGCCATTGGGGAACTGGTTGATCCAAGGTTAGGATATCACTATTCAGAACAAGAAGTATGCTGCATGCTGCATGCAGCATCCTTGTGCATAAGGCGTGATCCTCACTCTAGACCTCGCATGTCACAGGTCCTTAGGATTTTAGAAGGTGACATGGTCATGGACTACATGTCAACCCCAAGTTATGATGTTGGGAACCGGAGTGGTCGAATTTGGACGAATCAGCAGCAGCAGCAGCATCATCACTACCACCATGGTGGTGGTCCCCCGTTGGATGAAACAGTAGAGGTTATAGGTGGGAAACTTTCAATAGAGAAACACGAGAAGCCTGCCAACTGGCAAAGGGACAGGACAAGGCAGACACCTTGTGAACATATCTAG 2247 0.4424 MSKEQMKRGNLEKGSEGAEKVVVAVKASKEIPKTALVWALTHVVQPGDCITLLVVVPSQSSGRKWGFPRFAGDCASGYKKSHSAATSEQKCDITDSCSQMILQLHDVYDENKINVNIKIVSGSPCGSVAVEAKKGQASWVVLDKQLRNEEKQCMEELQCNIVVMKRSQPKVLRLNLVGSSKRDLETGPLPLDQEETSGKQTKKKNDSSDCVKVPAVTPSSSPESGTAFTTTEAGTSSVSSSDPGTSPFFISEMNADLKKEEAIQENNDHDDTNSDTDSENLSASSASLRFQPWVAELVSEQSSLLKIKEKFERFDDKSSASRTKGILDKFSSVDRDAGNGTSGRVEVDFSGNLREAISLSRNAPPGPPPLCSICQHKAPVFGKPPQWFTYAELEFATGGFSQVNFLAEGGFGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDGRRLLVYEYICNGSLDSHLYGRYQQPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIGELVDPRLGYHYSEQEVCCMLHAASLCIRRDPHSRPRMSQVLRILEGDMVMDYMSTPSYDVGNRSGRIWTNQQQQQHHHYHHGGGPPLDETVEVIGGKLSIEKHEKPANWQRDRTRQTPCEHI* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00138 748 PANTHER OS01G0750732 PROTEIN 162 678 - -
Pte19g00138 748 MobiDBLite consensus disorder prediction 212 247 - -
Pte19g00138 748 SUPERFAMILY Protein kinase-like (PK-like) 384 692 IPR011009 -
Pte19g00138 748 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 476 679 - -
Pte19g00138 748 Gene3D Transferase(Phosphotransferase) domain 1 476 682 - -
Pte19g00138 748 Gene3D Phosphorylase Kinase; domain 1 372 475 - -
Pte19g00138 748 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 372 475 - -
Pte19g00138 748 MobiDBLite consensus disorder prediction 729 748 - -
Pte19g00138 748 ProSiteProfiles Protein kinase domain profile. 400 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00138 748 ProSitePatterns Tyrosine protein kinases specific active-site signature. 521 533 IPR008266 GO:0004672|GO:0006468
Pte19g00138 748 FunFam Dual-specific kinase DSK1-like 12 165 - -
Pte19g00138 748 Gene3D HUPs 18 180 IPR014729 -
Pte19g00138 748 MobiDBLite consensus disorder prediction 182 247 - -
Pte19g00138 748 Pfam Protein tyrosine and serine/threonine kinase 404 669 IPR001245 GO:0004672|GO:0006468
Pte19g00138 748 CDD STKc_IRAK 406 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00138 Pte-Chr19 1083838 1089423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00138 380 674 Trihelix Transcription Factor Family AT1G70460 53.821 2.32e-100 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pte19g00138 PK_Tyr_Ser-Thr 9.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00138 - - qsa:O6P43_018291 1165.21