Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00133 ATGGCTACTGTATCAGGACAATTGATCTGGGAGATAGTGAAGAAGAACAACAGTTTTTGGGTGAAGCAGTTTGGTGACGGGACTGCTAAAGTTCAGTTCAGCAAAGAGAGCAACAATCTCTACAACCTCCACTCCTACAAACACTCTGGTTTGGCAAATAAGAAAACTGTTACTATTCAACCCCTTGGTAAGGAACAAGCTGTGTTGCTTGCAACCTCTTAA 222 0.4234 MATVSGQLIWEIVKKNNSFWVKQFGDGTAKVQFSKESNNLYNLHSYKHSGLANKKTVTIQPLGKEQAVLLATS* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00133 73 Gene3D - 1 73 - -
Pte19g00133 73 PANTHER 60S RIBOSOMAL PROTEIN L28 1 72 IPR002672 GO:0003735|GO:0005840|GO:0006412
Pte19g00133 73 Pfam Ribosomal L28e protein family 8 70 IPR029004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00133 Pte-Chr19 1024573 1025134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00133 1 73 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 78.082 1.97e-37 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00133 K02903 - mnt:21391498 129.413