Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00119 ATGTCGTGGCAAGCTTACGTTGATGATCACCTCATGTGCGATATCGAAGGCCATCACCTCACCTCCGCTGCTATCACCGGTCACGACGGCAGCGTTTGGGCGAAGAGCTCCACCTTCCCTGAGGGTGCTGGTGGGGTAACTGTCAAGAAGACGGGCCAAGCTCTGTTATTTGGATTGTATGATGAACCCATGACTCCAGGGCAGTGTAATATGGTTGTTGAGAGGTTAGGAGATTACCTGGTTGATCAGGGCCTCTAA 258 0.5233 MSWQAYVDDHLMCDIEGHHLTSAAITGHDGSVWAKSSTFPEGAGGVTVKKTGQALLFGLYDEPMTPGQCNMVVERLGDYLVDQGL* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00119 85 CDD PROF 2 84 IPR005455 GO:0003779
Pte19g00119 85 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Pte19g00119 85 SMART prof_2 1 85 IPR005455 GO:0003779
Pte19g00119 85 PRINTS Plant profilin signature 27 40 IPR005455 GO:0003779
Pte19g00119 85 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Pte19g00119 85 Pfam Profilin 1 40 IPR005455 GO:0003779
Pte19g00119 85 Pfam Profilin 41 84 IPR005455 GO:0003779
Pte19g00119 85 PANTHER PROFILIN 41 84 IPR005455 GO:0003779
Pte19g00119 85 Gene3D Dynein light chain 2a, cytoplasmic 40 85 - -
Pte19g00119 85 Gene3D Dynein light chain 2a, cytoplasmic 1 39 - -
Pte19g00119 85 PRINTS Profilin signature 21 30 IPR005455 GO:0003779
Pte19g00119 85 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Pte19g00119 85 SUPERFAMILY Profilin (actin-binding protein) 2 84 IPR036140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00119 Pte-Chr19 967007 976841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00119 1 86 Cytoskeleton Gene Families AT4G29340 48.889 4.91e-40 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00119 K05759 - cit:102614190 146.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00119 19 967007 976841 Pte19g00119 19 967007 976841 RCT