Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00117 ATGATACTTAAGCTTTTCATTGGGAAGTTACAAAATGTTCTCGGCAGATCACTCCTGGCCCCTTTGATTGAAAGGTTGAATGAAGAAATGGAAGCAGCGACGGTGGTGCCAGATGATGTAAAGAAGGGGCATTTCGCTGTCTATGCCATCATGGGTAAGGAAGTTAAGAGGTTTATAGTTGAATTAGGATACTTACAGAACCCTGCATTCTTGAGATTGCTGGAGCAGGCTGAGGAAGAATTTGGCCTCAGACAAAAGGGGGCTCTTGCACTCCCTTGTCGGCCCCAAGAATTGCAGGAGATTCTGGAGGAGCCTCGCACTTGGCAGATTTCTTGTGTCTAG 342 0.4649 MILKLFIGKLQNVLGRSLLAPLIERLNEEMEAATVVPDDVKKGHFAVYAIMGKEVKRFIVELGYLQNPAFLRLLEQAEEEFGLRQKGALALPCRPQELQEILEEPRTWQISCV* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00117 113 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 101 IPR003676 GO:0009733
Pte19g00117 113 Pfam Auxin responsive protein 34 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00117 Pte-Chr19 957851 958192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00117 27 93 Calmodulin-binding Proteins AT5G20810 49.254 9.34e-15 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00117 - K14488 cave:132162370 125.176