Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00108 ATGGCATCCCGTTTCTGCTTACTATGCACTGCCGTCATACTTGTTCTGCTTGTTGCGACTATTTGTGCTGAAGCTACCAGAGAATTTGAAGTGGGTGATGAATTTGGTTGGCGTGAGCCAGAGCTCAAGAACTCTACAATGTATATTCAGTGGGCTGAGAGGAACAGATTTCAAATTGGAGATACACTTCATTTTGAATATAAGAACGATTCAGTGTTCATGGTCGACAAATGGGACTACTATCACTGCAAGCCAAGTCATTACATAGTTGCCTTCAACAATGGTAATAGCACCTTCAAGCTGGATAGGTCGGGGCCTTTCTACTTCATCAGTGGAAACATGGTCCACTGTAAGAATGGGCAGAGGTTACTGGTGGAAGTCATGTCTATTCACGTCCCTCATTATCATTCTCCCCCAACCATTTCTCTTCCTCCTGAATCTTCTGCTTCTGCAATGGCTCCTGCTCCCCTTTCAAGGTCAGCGCTGTCAGCATCCATTCCAACAGTTACCGTTTCGATCGTCATGGCTCTGTCTGTGACATTTGTAGTTTGTCTAATCTAA 561 0.4456 MASRFCLLCTAVILVLLVATICAEATREFEVGDEFGWREPELKNSTMYIQWAERNRFQIGDTLHFEYKNDSVFMVDKWDYYHCKPSHYIVAFNNGNSTFKLDRSGPFYFISGNMVHCKNGQRLLVEVMSIHVPHYHSPPTISLPPESSASAMAPAPLSRSALSASIPTVTVSIVMALSVTFVVCLI* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00108 186 FunFam Early nodulin-like protein 1 26 132 - -
Pte19g00108 186 Pfam Plastocyanin-like domain 46 121 IPR003245 GO:0009055
Pte19g00108 186 Gene3D - 25 131 IPR008972 -
Pte19g00108 186 CDD OsENODL1_like 27 128 IPR041846 -
Pte19g00108 186 PANTHER BLUE COPPER PROTEIN 26 154 IPR039391 GO:0009055
Pte19g00108 186 ProSiteProfiles Phytocyanin domain profile. 27 129 IPR003245 GO:0009055
Pte19g00108 186 SUPERFAMILY Cupredoxins 28 128 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00108 Pte-Chr19 905392 906038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00108 7 142 Phytocyanin Superfamily AT1G79800 56.835 1.85e-51 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00108 - - qsa:O6P43_018196 191.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00108 19 905392 906038 Pte19g00108 19 905392 906038 RCT