Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00090 ATGGCAACAGACAGTTTCTCCAGCTCTAACCTACTTGGTCAAGGTGGGTTTGGTTATGTCCACAAAGGAGTTCTCTCAAATGGCAAAGAAGTTGCTATAAAGCAACTGAAATCTGGAAGTGGACAGGGTGAGCGTGAATTTCAGGCTGAGGTTGAGGTCATTGGTCGTGTTCATCATAGACACCTAGTATCTCTGGTTGGATACTGTATTTCTGGAGAGAGAAGACTGCTTGTTTATGAGTTTGTCCCAAACAATAATCTTGAATTTCATTTACATGAACATGATAGACCACCCATGGACTGGCAAACAAGAATGAAGATTGCATTGGGTTCTGCTAGAGGATTAGCATATTTGCATGAGGACTGTCAACCTAAAATCATACATCGTGATATCAAGGCTGCAAATATTCTACTTGACCACAGTTTTGAAGCAAAGGTTGCTGATTTTGGACTCGCTAAAATCTCGTTGGATACAGACACTCACGTCTCAACTCGAGTAATGGGAACTTTTGGTTACTTGGCTCCGGAATATGCAGCCAGCGGAAAGCTTACGGAAAAATCTGATGTCTTCTCTTTCGGCGTTGTACTTTTAGAATTGATTACAGGACATCGACCTATTGATAAAACTCAATCGTTCACTGATGATAGCATGGTGGACTGGGCTAGACCTTTGCTCTCTCAAGCTTTGGACACTGGCAACTTCGATGCTCTTGCTGATCAAAGGTTGGGAAAGAATTATGACTCTGATGAGATGCTTCGAATGATTGCCTGTGCTGCCACTTGTGTACGACATTCTGCAAGGCGTAGGCCTCAAATGAGTCAGGTTGTTCGAGCATTAGAAGGAATTATTTCTCTTGATGATCTTAACAAGGGAAGTGCACCTGGCCACAGTGCAGCATTCAGTTCCTTTGACAGTACAAGTTATGAAACTAACCAGTACAATGAGGACTTGAAGAAATTCAGGAAGCTCGTACTAGAAAGCCAGGACCAAGGTGCTAGTGAGTACAGTGGACCCAGTAGTGACTATGGAATGCATCCATCTGCTTCTAGCAGTGATCAGCAAACTACACAAGAAATGGAGTTGAAAAAATGA 1092 0.4277 MATDSFSSSNLLGQGGFGYVHKGVLSNGKEVAIKQLKSGSGQGEREFQAEVEVIGRVHHRHLVSLVGYCISGERRLLVYEFVPNNNLEFHLHEHDRPPMDWQTRMKIALGSARGLAYLHEDCQPKIIHRDIKAANILLDHSFEAKVADFGLAKISLDTDTHVSTRVMGTFGYLAPEYAASGKLTEKSDVFSFGVVLLELITGHRPIDKTQSFTDDSMVDWARPLLSQALDTGNFDALADQRLGKNYDSDEMLRMIACAATCVRHSARRRPQMSQVVRALEGIISLDDLNKGSAPGHSAAFSSFDSTSYETNQYNEDLKKFRKLVLESQDQGASEYSGPSSDYGMHPSASSSDQQTTQEMELKK* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00090 363 CDD STKc_IRAK 12 282 - -
Pte19g00090 363 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 2 330 IPR047117 -
Pte19g00090 363 ProSitePatterns Protein kinases ATP-binding region signature. 12 34 IPR017441 GO:0005524
Pte19g00090 363 ProSiteProfiles Protein kinase domain profile. 6 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00090 363 SUPERFAMILY Protein kinase-like (PK-like) 2 280 IPR011009 -
Pte19g00090 363 MobiDBLite consensus disorder prediction 329 356 - -
Pte19g00090 363 SMART serkin_6 6 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00090 363 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Pte19g00090 363 Pfam Protein tyrosine and serine/threonine kinase 9 279 IPR001245 GO:0004672|GO:0006468
Pte19g00090 363 Gene3D Transferase(Phosphotransferase) domain 1 82 293 - -
Pte19g00090 363 MobiDBLite consensus disorder prediction 328 363 - -
Pte19g00090 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Pte19g00090 363 FunFam Proline-rich receptor-like protein kinase PERK1 82 290 - -
Pte19g00090 363 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00090 Pte-Chr19 800397 803623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00090 3 329 Trihelix Transcription Factor Family AT5G38560 62.006 1.10e-150 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pte19g00090 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00090 - - qsa:O6P43_018150 621.698