Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00087 ATGGGGAAGGGAACTGGTAGTTTCGGTAAGCGCAGGAACAAGACACACACACTCTGTGTCAGGTGTGGCCGCCGAAGCTTCCATCTTCAGAAGAGTCGATGTTCAGCTTGTGCTTTTCCTGCTGCTCGCAAGCGGACATATAACTGGAGCGTGAAGGCGATACGCAGGAAGACCACTGGTACCGGTAGGATGAGATACATGCGCCACGTGCCTCGCAGATTCAAGAGTGGCTTCAGAGAAGGTACTCAAGCTGCACCAAGGAACAAGGGAGCTGCTGCTTCTGCCTAA 288 0.5347 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRNKGAAASA* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00087 95 PANTHER 60S RIBOSOMAL PROTEIN L37 1 94 - -
Pte19g00087 95 Pfam Ribosomal protein L37e 3 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Pte19g00087 95 ProSitePatterns Ribosomal protein L37e signature. 4 23 IPR018267 GO:0003735|GO:0005840|GO:0006412
Pte19g00087 95 MobiDBLite consensus disorder prediction 74 95 - -
Pte19g00087 95 FunFam Ribosomal protein L37 1 87 - -
Pte19g00087 95 Gene3D - 1 87 IPR011331 GO:0003735|GO:0005840|GO:0006412
Pte19g00087 95 SUPERFAMILY Zn-binding ribosomal proteins 1 55 IPR011332 GO:0006412
Pte19g00087 95 Hamap 50S ribosomal protein L37e [rpl37e]. 2 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00087 Pte-Chr19 786486 788455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00087 1 96 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 88.542 1.44e-59 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00087 K02922 - pvy:116110676 199.904