Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00073 ATGAAGAAAGAAAATATCAGCACTTCTAATACTGGAGAGCACACTGGTCGTTTTACACGGGCTCGAGCTGCTGCATTTCGTGAAACAGGCCAGTTGCCCCCTCTAAAGGGGCCTTCAAGGCCAAATTTGAAGCAGCCTACGCGAACCAATCCGAAGAGACCAACTCTGGACAATACAGCTCTTCAGCGCAAGAGGAGAGCAACACTGAAAGATGTCACCAATATCTGCTGTGAACCAACTTACAAAAGCTGTTTCAATGCTGCCAAAATTCAGATTAAGAAAAACAAGCAAGTAAAAGAAGGCCAGGCTAATATATCCAAAGCATTTCCTTCAGTTGGCGTTCGATTGACAATTTTGCAAAATGTTGCAGTACTAAACGCCTCCGCTGATATTTTGACAAAAGACGTCAAATCAGAGAAGTCCGCATTAGAAAATAATACAGTTCTTGGAGGAAGTGTTAATAACAACACTAGTTCAGATGATAATTTGTATGGAAATCAGAGTTCTGGAATTTGTTCTGAAAGTTCCAGTCCTCGAAGAAAAGCCAAGAAAGATGGCTTCTCTGGAGCTGTACCTGCGTCAAAGAATCCTGATATCGTTGATATTGATGCTGATCAAGAAGACCCTCAACTTTGCAGTATTTATGCGGACGATATCTACAAACATTTACGTGTAGCTGAGCTAACTCGAAGACCTAGTTCTAATTTTATGGAAACAATTCAACGAGATATCACTCAAAGCATGCGCGGGATACTTGTCGATTGGTTGGTCGAGGTTGCTGAGGAATACAAATTGGTACCAGATTCCCTTTATCTTACCATTCATTTCATAGATCGATTTCTGTCTCAAAATTACATTGAAAGGCAACTACTTCAACTGCTTGGCATCACTTGTATGCTAATTGCTTCGAAGCATGAAGAGATTTGTGCCCCGAGAGTTGAAGAATTTTGTTTCATCACAGACAGTACTTACACAAAAGAACAGGTACTAAAGATGGAAAGGCAAGTACTCAAGTACCTTGGGTTTCAGCTGTTTGCTCCTACTGCGAAGACATTCCTGAGGAGGTTTCTTCGAGCAGCACAAGCATCCTACAAGACCCCTATCCTTGAGTTGGAGTACCTAGCCAATTACCTAGCTGAGCTCACCTTGATGGACTATGGCTTCTTGAACTATCTTCCTTCACTCATTGCTGCATCAGCTGTATTTCTTGCAAGATGGACAATTAATCATTCAATCCATCCATGGAATTCTACTCTTGAACACTATGCTCATTACAAGGCATCAGATTTGAAAGTCACTGTCCTAGCATTACAAGAGTTACAGCTGAACACCGATGATTGTCCACTGAGTGCTGTTCGCACAAAATACACGCAAGAAAAGTTTAAACGTGTGGCAATATTGTCTTCACCAAAATTGCTTGACACCTTGTTCTAA 1434 0.4135 MKKENISTSNTGEHTGRFTRARAAAFRETGQLPPLKGPSRPNLKQPTRTNPKRPTLDNTALQRKRRATLKDVTNICCEPTYKSCFNAAKIQIKKNKQVKEGQANISKAFPSVGVRLTILQNVAVLNASADILTKDVKSEKSALENNTVLGGSVNNNTSSDDNLYGNQSSGICSESSSPRRKAKKDGFSGAVPASKNPDIVDIDADQEDPQLCSIYADDIYKHLRVAELTRRPSSNFMETIQRDITQSMRGILVDWLVEVAEEYKLVPDSLYLTIHFIDRFLSQNYIERQLLQLLGITCMLIASKHEEICAPRVEEFCFITDSTYTKEQVLKMERQVLKYLGFQLFAPTAKTFLRRFLRAAQASYKTPILELEYLANYLAELTLMDYGFLNYLPSLIAASAVFLARWTINHSIHPWNSTLEHYAHYKASDLKVTVLALQELQLNTDDCPLSAVRTKYTQEKFKRVAILSSPKLLDTLF* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00073 477 Gene3D - 218 465 - -
Pte19g00073 477 Pfam Cyclin, C-terminal domain 347 469 IPR004367 -
Pte19g00073 477 CDD CYCLIN_AtCycA_like_rpt1 208 343 - -
Pte19g00073 477 Pfam Cyclin, N-terminal domain 218 344 IPR006671 -
Pte19g00073 477 ProSitePatterns Cyclins signature. 249 280 IPR006671 -
Pte19g00073 477 FunFam Mitotic cyclin 6 232 332 - -
Pte19g00073 477 MobiDBLite consensus disorder prediction 151 176 - -
Pte19g00073 477 PANTHER CYCLINS 175 456 IPR039361 -
Pte19g00073 477 MobiDBLite consensus disorder prediction 1 63 - -
Pte19g00073 477 SMART Cyclin_C_2 347 470 IPR004367 -
Pte19g00073 477 FunFam Cyclin A1 334 466 - -
Pte19g00073 477 CDD CYCLIN_AtCycA-like_rpt2 347 461 - -
Pte19g00073 477 MobiDBLite consensus disorder prediction 42 57 - -
Pte19g00073 477 SMART cyclin_7 351 439 IPR013763 -
Pte19g00073 477 SMART cyclin_7 254 338 IPR013763 -
Pte19g00073 477 Gene3D - 232 345 - -
Pte19g00073 477 MobiDBLite consensus disorder prediction 151 192 - -
Pte19g00073 477 PIRSF Cyclin_A_B_D_E 35 476 IPR046965 GO:0016538|GO:0044772
Pte19g00073 477 SUPERFAMILY Cyclin-like 347 472 IPR036915 -
Pte19g00073 477 SUPERFAMILY Cyclin-like 207 344 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00073 Pte-Chr19 674643 679143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00073 1 477 Core Cell Cycle Gene Families AT1G80370 52.075 2.25e-160 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00073 K06627 - tcc:18595851 572.007