Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00036 ATGAATAGTAACTATACTTCCATCCCCAAAAGTTCATATGTAGAACTAGCTCTCCAACATGATCCTAGAATCCCTAAGCCTTCTTCCAAATCACTTGTCAAAAAGCTCTCTTTCAATGATGGAGGGTATGAGGAATCAAAGTTCGTCAACGGTGGTGACCTTGAGGACGACGACTTCGACGATGCATATCCTCTTATGATTGTCGGCTCCAATAATGGTTCTGGGGTAGCTGGGGCTGTGTTTAATCTAACCACTTCCATTATTGGAGCTGGGATTATGGCTCTTCCTGCGACTATGAAAGTTCTTGGGGTGGTTTTGGGGATTATTTTGATAATTTTGATGGGAATTCTATCAGAAATTAGTGTAGAACTGCTTGTGAGATTCTCGGTTTTGTGCAAAGCATCAACCTACGGGGAGGTTGTTCAATGTGCAATGGGAAGAACTGCCAGAGTTTTGTCAGAAGTATGTATAATTGTCAATAATGCAGGTGTTCTGGTCGTTTATTTGATAATAATGGGGGATGTTATGTCGGGATCCGTTCGTCACATGGGAGTTTTTGATCAACTTTTAGGAAATGGATTCTGGGATCATAGGAAGATTGTTATTTTGATCGTTATGGTAATCTGTCTTGCACCACTTTGTGCGTTGGAGAAGATTGATTCGTTGAGCTTGACCTCGGCTGCTTCAGTGGCACTTGCTGTTGTCTTTGTAGTTGTTGCGTTTGTTGTTGCACTTATTAAACTTGCTGAGGGTAAAATTGAGGCTCCAAGGATGACTCCTGATTTTGGTTCGAGAAAAGCCATCTTGGATTTGCTTGTGGTAATTCCCATCATGACCAATGCATATGTTTGTCATTTCAATGTGCAGCCAATATATAATGAGCTTGAAGGGCGTTCTCCTCGGAAAATGAACCGGGTAGGAAGGATTACCACCATTCTGTGCATTCTTGTTTATGCTTCAACTGCTATATCAGGTTATCTACTCTTTGGTGATGCTACGGAGGCCGATGTGCTGACTAACTTTGATAAGGACCTTGGTATTCGCTTTAGCGCAATCTTGAACTACATTGTCCGTTTTGGCTATATCCTCCATTTGGTTCTGGTGTTCCCTGTTATTCATTTCTCTTTAAGGCAAACTGTAGATGCTTTGTTGTTTGAGGGGTCACCTCCTCTTTCAGAAAGTAGGAAGAGATCTTTGGCTTTGACAGTGATCCTGCTAGTGATAATTTATATCGGTTCTACTATGGTTCCAAATATTTGGACGGCTTTTAAATTTACAGGAGCAACTACAGCGGTGTCATTGGGGTTTATCTTTCCATCTCTTATTGCCTTAAGGTTAAATCATCAAGGCAAGGATTTGAGCATTCTTGAGTGGTCCCTCTCATGGTCTATGTTGATACTGGCTGTGGTTGTTAGCGTCGTTGGAGTTATTGGTAATATTTACAGCCTTGAAAGTAAATCAGAGTAA 1467 0.4131 MNSNYTSIPKSSYVELALQHDPRIPKPSSKSLVKKLSFNDGGYEESKFVNGGDLEDDDFDDAYPLMIVGSNNGSGVAGAVFNLTTSIIGAGIMALPATMKVLGVVLGIILIILMGILSEISVELLVRFSVLCKASTYGEVVQCAMGRTARVLSEVCIIVNNAGVLVVYLIIMGDVMSGSVRHMGVFDQLLGNGFWDHRKIVILIVMVICLAPLCALEKIDSLSLTSAASVALAVVFVVVAFVVALIKLAEGKIEAPRMTPDFGSRKAILDLLVVIPIMTNAYVCHFNVQPIYNELEGRSPRKMNRVGRITTILCILVYASTAISGYLLFGDATEADVLTNFDKDLGIRFSAILNYIVRFGYILHLVLVFPVIHFSLRQTVDALLFEGSPPLSESRKRSLALTVILLVIIYIGSTMVPNIWTAFKFTGATTAVSLGFIFPSLIALRLNHQGKDLSILEWSLSWSMLILAVVVSVVGVIGNIYSLESKSE* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00036 488 PANTHER AMINO ACID TRANSPORTER 72 473 - -
Pte19g00036 488 Pfam Transmembrane amino acid transporter protein 74 480 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00036 Pte-Chr19 387596 390155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00036 1 489 Amino Acid or Auxin Permease AAAP Family AT1G80510 75.051 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00036 - - hbr:110651081 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00036 19 387596 390155 Pte19g00036 19 387596 390155 RCT