Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00022 ATGGCTTCCAACGAAAGCTCAGCTCCTAGATCTCAATTTATTGCAAGTACCGGAAACGGAAGCATGTCCAGTGCACCTTTGATTGATAATAGAGATGCTGGGCAAATTATTGTGCCTGATAAGAGAAGCTGGAAAAACTTATTCGCATACATGGGTCCTGGATTTCTAGTTTCTATTGCATATATAGATCCTGGAAACTTTGAAACTGATCTTCAGTCGGGAGCACAGTATAAATATGAGTTGCTGTGGATCATATTGGTGGCATCTGCTGCAGCTCTCATCATCCAGTCCCTGGCTGCTAATCTAGGGGTTGTCACTGGAAAGCATTTGTCAGAGCACTGTAGGACTGAATATCCTCGGGTCACAAACTTTATTCTATGGGTTTTAGCTGAAATTTCTATAGTTGCTTGTGATATTCCTGAAGTGATTGGAACTGCCTTTGCATTAAATATGCTTTTCAGCATACCTGTTTGGATTGGTGTTCTGCTTACTGGGCTTAGCACATTATTTCTTTTGGCGTTGCAACAATATGGGGTTCGAAAACTTGAGTTCCTGGTAGCGTTTCTCGTGTTCACCATTGCTGCATGCTTCTTTCTGGAGCTTGGTTATGCGAAACCTGACGCTAAAGAAGTTCTGAAGGGTCTTTTTGTACCACAACTTAAAGGCAGTGGTGCTATTGGCCTTTCAATTTCACTACTAGGAGCCATGGTTATGCCGCACAATCTCTTTCTCCACTCAGCATTGGTGCTTTCACGGAAAATACCTCGATCGGTTCGTGGCATCAACGAGGCCTGCAGATTTTATATGATAGAAAGTGCATTTGCTCTCACGGTGTCATTTCTCATAAATATCGCTGTTATCTCTGTAAGTGGTGCAGTTTGCAATTCTTCTAATTTGAATGTAGAAGATCAAGAGAGCTGTCAAGACTTGGACTTGAACAAAGCTTCTTTTCTACTAAGAAATGTGCTGGGGAGTTGGAGTTCAAAACTTTTTGCAATTGCTTTACTTGCATCAGGTCAAAGTTCTACCATAACTGGGACATATGCTGGGCAGTATGTTATGCAGGGATTTCTTGATTTACGACTGAAACCATGGATCCGCAACTTGTTGACTCGTTGCTTGGCTATATTCCCTAGCTTGATTGTTGCAGTTATAGGTGGCTCTGCTGGTGCCGGGAAGCTAATAATTATTGCATCGATGATTCTGTCGTTTGAGCTTCCTTTTGCTTTAATTCCTCTCCTGAAGTTCACGGCTAGCAAAACCAAGATGGGAATGCATGCAAACTCTACTACGATTTCGGCCATCACTTGGCTACTAGGTTCCCTCATCATGACTATAAACATATACTATCTAGTGACTGGCTTTCTGAAGTTGCTTCTTCATAGCCACTTGAGAAAGGGAGAAGTAGTGCTTCTGGGGGTGTGTGGTTTCTCAGGTATGGCAGTGTATTTGGCTGGAATTGTGTATCTGGTTTTCCGCAAAAATAAGGAGGCCACACACCTTTTGGCATTAACAGCATCTGAGAATCAAGATGTCGACACTGATCAACATAACTCCCCCATTTATAATCTCCCAAGGATCGACATAGTAAGCATGCAATTGCCTCAGAGAAACAGCACAGCAGCTGATATTGACTAA 1638 0.4249 MASNESSAPRSQFIASTGNGSMSSAPLIDNRDAGQIIVPDKRSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASAAALIIQSLAANLGVVTGKHLSEHCRTEYPRVTNFILWVLAEISIVACDIPEVIGTAFALNMLFSIPVWIGVLLTGLSTLFLLALQQYGVRKLEFLVAFLVFTIAACFFLELGYAKPDAKEVLKGLFVPQLKGSGAIGLSISLLGAMVMPHNLFLHSALVLSRKIPRSVRGINEACRFYMIESAFALTVSFLINIAVISVSGAVCNSSNLNVEDQESCQDLDLNKASFLLRNVLGSWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKPWIRNLLTRCLAIFPSLIVAVIGGSAGAGKLIIIASMILSFELPFALIPLLKFTASKTKMGMHANSTTISAITWLLGSLIMTINIYYLVTGFLKLLLHSHLRKGEVVLLGVCGFSGMAVYLAGIVYLVFRKNKEATHLLALTASENQDVDTDQHNSPIYNLPRIDIVSMQLPQRNSTAADID* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00022 545 MobiDBLite consensus disorder prediction 1 21 - -
Pte19g00022 545 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 23 499 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte19g00022 545 Hamap Divalent metal cation transporter MntH [mntH]. 39 455 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte19g00022 545 Pfam Natural resistance-associated macrophage protein 67 429 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte19g00022 545 PRINTS Natural resistance-associated macrophage protein signature 179 200 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte19g00022 545 PRINTS Natural resistance-associated macrophage protein signature 229 252 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte19g00022 545 PRINTS Natural resistance-associated macrophage protein signature 126 152 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte19g00022 545 PRINTS Natural resistance-associated macrophage protein signature 154 173 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte19g00022 545 PRINTS Natural resistance-associated macrophage protein signature 339 358 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte19g00022 545 PRINTS Natural resistance-associated macrophage protein signature 367 384 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte19g00022 545 PRINTS Natural resistance-associated macrophage protein signature 399 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte19g00022 545 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 46 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte19g00022 545 NCBIfam Nramp family divalent metal transporter 52 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00022 Pte-Chr19 309107 316048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00022 15 546 Inorganic Solute Cotransporters AT1G15960 76.404 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00022 K21398 - gmx:100797298 862.833