Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00021 ATGGATTACTCATCTTGGATAAACGCGTCTTTGGATCTTAACATGAATCCTCTCAGACCAGTTGATGAAACTTCTGCAACTAAAAAAGAGGTGGAAAGCAACTTCTTGCAGTTGGGAAGGAAGCCCTGTGTGAATAATCAAGAGGCTAATGCTTTAATGGAGGAATTGAACCGAGTCCGTGGAGAAAACAAAAAGTTGAGTGAAATGCTTACTGAGATGTGTGAAAACTACAATGCTCTTCGAGATCATTTGATGGATTGCATGAAAAAGAACCCAGAAAAAGATCTGACCTCATCAAAGAAAAGAAAGTCAGAAAGCACCAATACCAATGACAATAGTGAAACACCAGGAATCAATGGAAACTCAGAAAGCAGCTCAACTGATGAAGAATCCTACAAGAAACCAAAGGAAGAAAGCACCAAGGCCAAAACTTTAAGACTTTATGTCAGGACTGAAGCATCTGATACAAGCCTTGTTGTAAAGGATGGCTATCAATGGAGAAAGTATGGGCAGAAGGTGACTAGAGACAATCCTACTCCAAGGGCATACTTCAAATGCTCTTTTGCTCCGAGCTGTCCAGTCAAAAAGAAGGTGCAAAGAAGCGTGGAAGACCAATGTGTTTTGGTTGCAACCTATGAAGGAGAGCACAACCATCCCAACACTTGTTCGCTGGAAGCAACATCAGGTTCCAGACAAACTCTGGGGCTTGGTTCAATGCCCGAAACAGCCTCTTTAAGCTCCACTGGACCTATAATCACACTTGACTTAACAAAAACAAAGTTCACTAATGATGCCAAGAATTCAAAAGCCAAGATTCAGTCACCAGAAATGCAGCAGTTCTTGGTGGAACAAATGGCTTCTTCCTTGACCGAGGATCCTAACTTTACAGCAGCACTAGCTGCAGCAATATCTGGAAATATCTTGCACAAGAATCTGGTGGACAAGTGGTGA 951 0.4206 MDYSSWINASLDLNMNPLRPVDETSATKKEVESNFLQLGRKPCVNNQEANALMEELNRVRGENKKLSEMLTEMCENYNALRDHLMDCMKKNPEKDLTSSKKRKSESTNTNDNSETPGINGNSESSSTDEESYKKPKEESTKAKTLRLYVRTEASDTSLVVKDGYQWRKYGQKVTRDNPTPRAYFKCSFAPSCPVKKKVQRSVEDQCVLVATYEGEHNHPNTCSLEATSGSRQTLGLGSMPETASLSSTGPIITLDLTKTKFTNDAKNSKAKIQSPEMQQFLVEQMASSLTEDPNFTAALAAAISGNILHKNLVDKW* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00021 316 SUPERFAMILY WRKY DNA-binding domain 157 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte19g00021 316 Gene3D WRKY domain 145 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte19g00021 316 SMART WRKY_cls 160 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte19g00021 316 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 46 307 IPR044810 GO:0003700
Pte19g00021 316 ProSiteProfiles WRKY domain profile. 155 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte19g00021 316 Coils Coil 49 69 - -
Pte19g00021 316 MobiDBLite consensus disorder prediction 91 142 - -
Pte19g00021 316 FunFam WRKY transcription factor 40 145 222 - -
Pte19g00021 316 Pfam WRKY DNA -binding domain 161 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte19g00021 316 MobiDBLite consensus disorder prediction 127 142 - -
Pte19g00021 316 MobiDBLite consensus disorder prediction 109 126 - -
Pte19g00021 316 MobiDBLite consensus disorder prediction 91 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00021 Pte-Chr19 302756 304736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00021 50 315 WRKY Transcription Factor Family AT1G80840 55.957 3.28e-94 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte19g00021 WRKY 1.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00021 - - qsa:O6P43_017941 442.965