Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00018 ATGCCTTCAAGACCCTTCCCTCCCAGCCCTTTCTCTTCGAGACCAAATATATTCACCAAATCCAGGGTCTTGCTCTTGACCCTTAGCATTTCAGTTTTCCTTGTAATAATTGCTTCAGCGTTTTATTTCATTTATCGTCTGTGGCGCTCTATCATACACAGAGATAAAACTAATCCATTTGACTCAAGTACTCCTTTGACGCTCCAAAAATTTTCATACAAAGATCTCAAGCATGCTACCAATGGATTTGACACTTCCAATGTAATTGGCAAAGGTGGTTCTGGCACTGTTTTCAGAGGGATGCTTAGAGATGGTAAACCGATTGCTATCAAGAGGTTGGATACTTTGTCTTTGCAGGCAGAGCAGGTTTTCCAGAATGAACTTCAGATTCTAGGTGGTTTAACGTCACCATTTCTGGTGACCCTTTTGGGTTATTCTGTTGAGAAGAATGAGAAGATGTTGATTTATGAATATATGCCAAATCGAAACCTGCAAGAATCTCTTTTTGAAGAAGAGGGTTTGACTTTAAGTTGGGATACAAGATATCAGATTATTCTGGACGTTGCTAGAGGTATACAGTTCTTGCACCTAGGATGTGATCCACCAGTCATCCATGGTGATATTAAGCCAAGCAATGTTTTGCTTGATGCAGAGAACCGTGGAAAGCTTTCAGATTTTGGATTGTCGAGGATTAAAATGGAAGGTGAATTTCGTGCGGATTTGATTAGCCAGGAATTAGGCAAGAGTCAGGAGCTATGGAAGAGCCAAGACCTTTCATGTAATTTGACTGTTGAGACTCCTCCAATTGGTACTCCAGCTGAGAATACGAAAGAGGTAGATGTTTCCCTTGCCTTGCAAGCTTCATTTTCATATAGTAGAAATTGTTGTAGTGCTAAAACTTTGAAGTTGAACTCTTTGAACCACAATGCTAGTCTAGCTACTGAGCATGGAATTAGGTTTGGTAATGCAAAGGGTAAAGAGGTTGTGAAGTTAGATGTTGGTGGGGATGATTGGACCAGTAAGTTTCCTCGTGAATATGAGCTTTCTAGCGTTGATCACAGCAGGAAGCAAGATGTTAACACTTTCGTTGTGCCTGAAAATGAGGCAAATTCAAAGCTGTGGGGTAAGGATTGGTGGCGGAGACAGGATGGGAGTGGTGAATTATGCAGCAAAGATTATGTAACGGAGTGGATAGGAAGTCAGATTTGCCCCTCAAACCCTGAATGTAATGGAGAAAAGGCCAATGCTGATGACGTGGATAATTCAAATATGGAATATGAACAAGGCAGGTCCCAACTACAAGAGTGTGGCCTAGAAAATAGTGCCAAGAACCAAGAATCAATGTTAAAGAAGCATAGTGTGAGAAAGCAGAGAAAAATGCAGGAGTGGTGGGATGAAGAGGAATTAGCTGACGAAAGAAAGAATGGTGGTAAGCTGAAAAATCTCGGGAGGAAGTTGAAGAAAGGATCCAAAATATCGCATTTTAAACATTGTAGACTGTTCTACTTTCGGAGGAGAAAGAATGAGCAGACTCAGAAAAATGGTGAGTTCAGTTTCAGGAGAGGCTGGAAGGGAAAAAATAACAAGTCCAGCGGTAGTGACGTGTGGGGTGGAGATTTTTTTAGCCGTGAACTCAGTAGCACTACTAGTATGAGAGGAACACTGAGTTATGTGGCTCCTGAATGTGGTGACAGCTATGGATTTTTTATGGAGAAGGCTGATATATACAGTCTAGGTGTTCTAGTACTTGTGATAGTGTCGGGTAGAAGACCTCTGCATGTTCTTGCCTCTCCAATGAAGCTAGAAAAGGCTAATTTGGTAAGCTGGTGTCGCAACTTGGCCCAAACTGACAAAATTTTAGAACTAATTGATGAAAGATTGAAAGATGAATACAGTAAGGAGCAAGCAAACTTGTGCATCAATTTAGCACTTGCTTGCTTGCAGAGAGTACCAGAGTTGCGTCCAGATATAGAAGATATTGTTAAGATTTTGAAAGGGGAGATGGACCTTCCACCATTCCCATCTGAATTATCCCCTTCTCCACCTTCCAGATCTTACAGTAAATCTCGAAGAAAATAG 2079 0.4127 MPSRPFPPSPFSSRPNIFTKSRVLLLTLSISVFLVIIASAFYFIYRLWRSIIHRDKTNPFDSSTPLTLQKFSYKDLKHATNGFDTSNVIGKGGSGTVFRGMLRDGKPIAIKRLDTLSLQAEQVFQNELQILGGLTSPFLVTLLGYSVEKNEKMLIYEYMPNRNLQESLFEEEGLTLSWDTRYQIILDVARGIQFLHLGCDPPVIHGDIKPSNVLLDAENRGKLSDFGLSRIKMEGEFRADLISQELGKSQELWKSQDLSCNLTVETPPIGTPAENTKEVDVSLALQASFSYSRNCCSAKTLKLNSLNHNASLATEHGIRFGNAKGKEVVKLDVGGDDWTSKFPREYELSSVDHSRKQDVNTFVVPENEANSKLWGKDWWRRQDGSGELCSKDYVTEWIGSQICPSNPECNGEKANADDVDNSNMEYEQGRSQLQECGLENSAKNQESMLKKHSVRKQRKMQEWWDEEELADERKNGGKLKNLGRKLKKGSKISHFKHCRLFYFRRRKNEQTQKNGEFSFRRGWKGKNNKSSGSDVWGGDFFSRELSSTTSMRGTLSYVAPECGDSYGFFMEKADIYSLGVLVLVIVSGRRPLHVLASPMKLEKANLVSWCRNLAQTDKILELIDERLKDEYSKEQANLCINLALACLQRVPELRPDIEDIVKILKGEMDLPPFPSELSPSPPSRSYSKSRRK* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00018 692 SMART serkin_6 83 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00018 692 MobiDBLite consensus disorder prediction 669 692 - -
Pte19g00018 692 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524
Pte19g00018 692 FunFam Os07g0541700 protein 159 247 - -
Pte19g00018 692 ProSiteProfiles Protein kinase domain profile. 83 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00018 692 Gene3D Phosphorylase Kinase; domain 1 49 158 - -
Pte19g00018 692 SUPERFAMILY Protein kinase-like (PK-like) 57 685 IPR011009 -
Pte19g00018 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Pte19g00018 692 FunFam Receptor-like serine/threonine-protein kinase At4g25390 52 158 - -
Pte19g00018 692 Gene3D Transferase(Phosphotransferase) domain 1 487 670 - -
Pte19g00018 692 Gene3D Transferase(Phosphotransferase) domain 1 159 271 - -
Pte19g00018 692 Pfam Protein kinase domain 545 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00018 692 Pfam Protein kinase domain 85 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00018 692 PANTHER OS07G0586332 PROTEIN 17 692 IPR044576 -
Pte19g00018 692 FunFam Receptor-like serine/threonine-protein kinase At4g25390 520 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00018 Pte-Chr19 276249 278327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00018 532 664 Receptor kinase-like Gene Family AT3G58690 33.582 8.59e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Pte19g00018 Pkinase 1.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00018 - - gmx:100800845 822.387