Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00011 ATGGCTAATCAGATAGATAATTTGGAGAATCTTCACGTTGCTAGGAATTTCTTGAGGATCAGTTTAGAAAAATCGAAATCCCTTGCGTCTGCATTAGATGAGGCTGGGTCAAGATTGGAGCCTATTAGTCGTAGATGGCTGTCTTTGGAGGCAGCAGTGAGTTCTCTGCAAACGAAAAGAACCTTATGTTTTGAAATGGGAGACCACATCGATCGTGTCATAGGCCCCACTGCTGCAGTTCTTAGAGTCTTTGAAGCTGTGTGCCAACTGGAAAAATCACTCTCCACACACGCATACGCTACCGACGATCTTTGCTATTATATCTCAGACCTTAAACGTCTTGAAGAAGCATTGAGATTTCTCACTAATAATTGCAAGCTTGCAATTCGCTGGTTGGAGGCAGTAGATGGACTCCTCGGTGACAATGCCATCACGACTGGCTTGTACAGGGAGAATGTGAATAGGTGCATAAGAATCCTGCGAGAGTTGTTGGTGATGGAAGAGCGTGCTCGTGTTGACGGTGGACTTCTCAGTGCAGCGTTTTGCAAACTTCAGGTGGAATTCAGACAGCTTCTGACAAAGAATACCCTTCTTTTTCCTTTTTTTTTTAAGGGGATGCAGCCAGATATTGAAGACGGAGATATTGACTCATCATCCCATTTGCCAGAGGGTATCATTGCTAAACTACAAGCTATACTCGAGAGATTAAATGCTAATGGAATGTTAGAGAAGTGCGTAGCCATGTATGTTGAGGCACGGGGCCTAAATGCTCGGAAAAGTTTGCAGACTCTGGATTTGAGTTATCTTGAAATGTCGGTCTGTGATTTGGAGAACATGCATGGTATTGAGAATCACATAGATCAATGGGGCAGGCATCTGGAGCTCGTTGTCAATCATCTGCTTAAGGTCGAGTATAGGCTCAGTTTTGAGGTCTTCCAGAGATATGGCTCGGATACATGGACTTCATGCTTTGCAAAAGTCTCAACGCAGTCAGGAATTCTTTCTTTCCTCCAATTTGGGAGAAATGTAGCCGAGACTAAGAGAGCTCCCTCGAAGCTTCTGAGGGTCTTGGACGTATTCGCTGTCTTAAATAATCTGAGATTAGATTTTAATAGACTTTTCAACTGGAAAGCCTGTCAAGAAATTCAAACCGTGACGAGGGATCTTGTCAAGAGGGTTGTCGATGGTGCCTCTGAGATTTTCTGTCAACTGCCAGACCAGGTGGAGTTGCAGCGGCATGTTTTGCCTCCTGCTGATGGCAATGTTCCATGGCTGGTAAGCTTTGTAACTGAGTACTGCGATCATCTGCTTGGAGAAAAATACAGGCCATTGTTGGACCAGGTCTTAGAGATCAAATTGAGTTGGTCGCTGCAGAAATATGAAGAGAGAATTTTAATGAATAATAATATATATAATGTTATGAAACAGGTTGCACTTAATTTGGATGCATGGTCAAAATACTATGAGCGTCAGGATCTCTCTTTAGCATACCTTTTCATGATGAATAATCATTGCCATTTCTCCAATCTGAGAGGCACGAAGCTGGGTGATAAGATGGGAAATTCTTGGTTAAAAGCTCATGACCAGTACAAGGAGTATTATGCTGCTCTTTATTTAAGGGAGAGTTGGGGAAAGCTTATTCCTCTCATTACTTGTAAGGAACTTGTGTCCTCAAAGGTCCAAAGCTTAGGTGATAGACTCAGGCAATTTAATTCGGGTTTCGATGAGAGGTATAAGAAGCAATGCAGATGGATTATCTGTGATGATAAGTTAAGAGAAAAGGTGCGCAAGCATTTGGTTGAAGGAATAGTACCCAATTACAGGGAATACATGCAGAATTTCCTTTTGTCAGCTGAGAGTGATGCTAAGATCATTAGGCATGCTAAATACTCAGTGCAGAGTTTGGAAAACATGCTTGGCACTCTGTTTCAACCTCAGCTAAGCAACGGCTGCGGCAGTGTGAAACATGCAAGCTTAGTGGGTAGAATAACAAGCTTAGTGAAGGAGACCCATTATTTTCAATTGCCTTCAACAAAAGTTTGA 2043 0.4258 MANQIDNLENLHVARNFLRISLEKSKSLASALDEAGSRLEPISRRWLSLEAAVSSLQTKRTLCFEMGDHIDRVIGPTAAVLRVFEAVCQLEKSLSTHAYATDDLCYYISDLKRLEEALRFLTNNCKLAIRWLEAVDGLLGDNAITTGLYRENVNRCIRILRELLVMEERARVDGGLLSAAFCKLQVEFRQLLTKNTLLFPFFFKGMQPDIEDGDIDSSSHLPEGIIAKLQAILERLNANGMLEKCVAMYVEARGLNARKSLQTLDLSYLEMSVCDLENMHGIENHIDQWGRHLELVVNHLLKVEYRLSFEVFQRYGSDTWTSCFAKVSTQSGILSFLQFGRNVAETKRAPSKLLRVLDVFAVLNNLRLDFNRLFNWKACQEIQTVTRDLVKRVVDGASEIFCQLPDQVELQRHVLPPADGNVPWLVSFVTEYCDHLLGEKYRPLLDQVLEIKLSWSLQKYEERILMNNNIYNVMKQVALNLDAWSKYYERQDLSLAYLFMMNNHCHFSNLRGTKLGDKMGNSWLKAHDQYKEYYAALYLRESWGKLIPLITCKELVSSKVQSLGDRLRQFNSGFDERYKKQCRWIICDDKLREKVRKHLVEGIVPNYREYMQNFLLSAESDAKIIRHAKYSVQSLENMLGTLFQPQLSNGCGSVKHASLVGRITSLVKETHYFQLPSTKV* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00011 680 SUPERFAMILY Cullin repeat-like 80 643 IPR016159 -
Pte19g00011 680 PANTHER EXOCYST COMPLEX PROTEIN EXO70 146 643 IPR004140 GO:0000145|GO:0006887
Pte19g00011 680 Pfam Exo70 exocyst complex subunit 288 639 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pte19g00011 680 Gene3D Exocyst complex component Exo70 147 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00011 Pte-Chr19 207153 209195 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00011 7 646 EXO70 exocyst subunit family AT4G31540 45.496 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00011 K07195 - qsa:O6P43_017886 665.225