Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00006 ATGAACATGGAGACACTTGAGAGCCGTTTGCAGAATTTGATCAGGCGATCTCAAGCCAATCAGAACCAACAATATCAACCATTGATTAATTCTTCTTCCCCAAACAGCATGATGATACCCACCCCTGGAATGCAAAATATGGGAAATGCTGGTTCAGCAGTTACATCTTCAGATGCTTCCATGATCTCCACCAGCGGATGCAATAATATAGGTCCTAATGCTGTCAATTATGGTGTCATGTATACGACTGGCGGTATGCATAGCGACTCTCTCAATGGTCTTTTGGCCAATGGATACCAGCAGTCCTCTGCAGGATTTTCAAATAGTTCTGGGGGGATTATGTCGTCAATGGGCGCTCAACGAAATGCAAGCCAGATGATACCTACACCTGGGTTAAATGGCAGCACCAGTAGCTCATACATGAATTTAGATTCATCTATTAATAGTCAATTTTCAAATGTGGATTCCGCTGTAATATCCCATCCATATCAGCAAAAGCTGAACGTTGGTGGGCAGAATGGCCGCATATTGCAGAACATTGGTGGCCAAATGGGTGCAGGCATTAGATCTGGCTTATATCGGAGGCCAGTTGGTTTTCCAAATGGAGGTCTAAGTAATGGTGTGGGACTAGTAGGAAGCAATGTGCAAGTCACGAATGAATCTGGAACTTCTGAAGGCTATCTTAGTGGACCACCCTATACTAGTTCCCCTAAATCTATGCAGTACCATTTTGAGCAACACGAGGAACCAATATTACAAGGTGATAGTTATAGGTTGAGCAATGTTGAGTCTTTTCCTTCTGGAAGCTTCTGTGGTGCTCCAGCATCCTGCGTATCTGAGAAGAATTCTGATAGCACAAATCAATTAAATTTGCCATCTTTGTCAAAGAGCAGTTCTGTAATGGGGAATCAGTCCAATCTCCAGGGCACACTGCAGTCTGCCTATCAAAAGTCTCGAACAGCTGACCAGGCAGCAAAGTTGGATTTACACGCATCAGTATCTCAGAGGATTGACATTGTTCCCTCTCATCAACAATGCGAGCAGCAATGCCATCAATTTCAACCACAGACAAATCGTTGTGGTCATCAGCAGAATCACCAACAGATATTGCGACATTTAAACCACCAACATGGCACCAATAGTGACATTTTGGTTCACACAGATCTATTGTCTGACATTACGAGTCAGGGAAAGTCTGATCATGGTTTGGACCATCATAAAGAAGGCCTAAAATCACATGTCACTGAGCACTTCCACGCAACCATGATGCAGTCTCAGCAAAACGTATCTGAAAAACACTCCAGCTCTGCCCATAGTTTTCCATATTCACGTGGACAGGATGGCTTGTCTTCATCACTGCCACAAAATTCTCAAAAGATGCAACAAATGTTTCAGGCACAACAACTTGATGCCAATTCTCAACATATCAACTGCATTTCCGTTGGAGGACATTCTGAGCCGGTGCTTCAGGTTCAATGGAACTCTCCAATACCAGAATTAACTCATTCAAATGGGAACATCTTGCCTAATCAGCTTCTCCATGAAGATTTTCTTCGAAGGATATCAGGAAAAGATGAAGTCCAGTGCAATAATTTTTCATCTGATAGATCTACTATCAGTCAAGCAGTTCCTTCAAGAGCTTTGGGTGTTCCTCGGGATGTAGCTGGCACTATCGGTAGATCTGCTAGCATAAACCAGGAAAAACAATTTCGCAACCAACAGCGGTGGCTCTTATTCTTAATTCACTCGCGCCGATGTAATGCCCCAGAAGGAAAATGTGCAGAGCATAATTGTTTGACTGTTCAGAAGTTGTGGAAACACATTCAAAATCAGAATTGCAACAAGTCTGATTGCTCATACCCACGTTGTCATCATACAAGAGTCTTGCTTAATCATTACAGATTTTGCAGGGAGCCTCGTTGTCCCGTTTGTGTTCCTGTTAGAGCCTATCATTTTAAGCACCGCACTCATACAACTTTTCAGTCTGCAGTACCTGCTGCAGTAAATGGATCCTCAAAATCCTCTGAAATTGGAGATCACTTAAGCAGATCTATTTCAAAGCCTGCCGAAGTTTTTGAAACTTCAGAAGATCTTCAACCATCCTTGAAACGCATAAAACTTGAGCAGGGTATGCTGAATCTTATCCCCAAGTGTGAAAGCTCTGCTTTATCAGTTTCCACTTGTAGTGAACCTCATATTTCCCAGGAAAGCCAGCACCTAGATTCGTTACAACATGGATTGTGCTTGCCAGTTAAAACAGCGGATGTGAAGACAGAGTTTCCAATTGGTTCTGACCAAGTTGATGGCCAGATGAATGAGGACAATGTAGACAGTGTCTGTAACCAAAGATGTGATGGTGATTCTAAAGAACTTACCTGCTTGGTTAAGCAGGAAAGTATCAAAATGGTAGAGGAATTTCAAGAAGATAGACAAGAAAACATGAGGGCACTGGAAAACACAGCAGGAACAAAGTCCGGTAAGCCCAAAATAAAGGGAGTGTCCCTGACTGAACTTTTTACACCGGAGCAAGTTAGAGAGCATATTGCTGGTCTTCGGCGGTGGGTTGGGCAAAGTAAAACAAAGGCGGAGAAAAATCAAGCGATGGAGCACTCGATGAGTGAGAACTCCTGTCAATTATGTGCGGTTGAGAAGCTCACTTTTGAACCACCACCTATTTATTGCTCAACATGCGGCGCTCGCATTAAAAGAAATGCAATGTATTATACTATGGGAGCTGGTGATACCCGGCACTATTTTTGCATCCCATGCTACAATGAGACTCGTGGGGATACTATTCTTGTTGATGGGTCTGCGATTCCCAAAACCAGGTTGGAAAAAAAGAGAAATGACGAGGAGACTGAGGAATGGTGGGTTCAATGTGATAAGTGCGAAGCTTGGCAACATCAAATCTGTGCTTTGTTTAATGGTAGAAGGAATGATGGTGGACAAGCTGAGTACACTTGCCCAAACTGCTATACTCAAGAGGTTGAGAGAGGAGAACGAAAGCCCTTGCCGCAGAGTGTGGTTCTTGGAGCCAAAGACTTGCCAAGAACGCTGCTGAGTGACCATATAGAGCTGCGATTATTTAGGAAACTAAAGCACGAAAGGACAGAGAGGGCAAGGCTCCAAGGAAAAAGTTATGAGGAGGTTCCTGGTGCTGAGGCACTTGTTATAAGAGTCGTTTCATCTGTTGACAAGAAGTTGGAAGTGAAGCAGCGTTTCTTGGAGATTTTTCAAGAAGAAAATTACCCATCCGAATTTCCATACAAGTCCAAGGTGATTTTGTTGTTTCAGAAGATTGAAGGTGTGGAAGTTTGCTTGTTTGGCATGTATGTTCAAGAATTTGGATCCGAATGCAAATTTCCTAATCGGCGGCGAGTTTATCTTTCATATCTTGACTCTGTAAAGTATTTTAGACCTGAGATTAAAACAGTGACCGGAGAGGCCCTCCGAACATTTGTTTACCATGAAATATTAATTGGATATCTGGAGTATTGCAAGAAAAGAGGTTTCACAAGCTGCTATATATGGGCATGCCCTCCGCTAAAGGGTGAAGATTATATTTTATATTGTCATCCAGAAATTCAGAAAACACCAAAATCTGACAAGCTCCGAGAATGGTACTTATCAATGTTAAGGAAAGCGTCGAAGGAGAATATTGTTGTCGATCTAACTAATTTATACGACCATTTCTTCGTATCTACTGGTGAATGTAAGGCTAAGGTGACTGCAGCTAGACTCCCATATTTTGATGGTGATTACTGGCCTGGAGCTGCAGAGGATCTAATATATCAACTTCGTCAAGAGGAAGATGGAAGAAAACAGAATAAGAAAGGAACAACAAAGAAGACCACCATAACAAAGAGGGCTTTGAAAGCATCCGGTCAGTCTGAACTTTCTGGGAATGCTTCAAAGGATCTGCTTCTCATGCACAAACTTGGTGAAACCATTTGCCCGATGAAGGAGGATTTTATCATGGTTCATTTGCAGCATGCTTGCAATCATTGTTGTATTCTGATGGTAGCTGGACACCGATGGGTATGCCGTCAGTGCAAAAATTTTCAGATGTGTGACAAATGTTATGAAGCTGAACAAACGCATGAGGAAAGAGAAAGACATCCGGTTAATCAGAGGGAGAAGCACATCCTGTGTCCTGTAGAAATTAATGATCTACCTGCTGATACAAAAGACAAAGATGAGATTCTTGAAAGTGAATTTTTTGACACCAGACAGGCATTTCTGAGTCTATGTCAAGGGAACCATTACCAGTATGATACCCTACGCCGTGCAAAACACTCCTCAATGATGGTCCTCTATCATCTTCATAATCCAACTGCTCCAGCATTCGTCACAACATGTAATTTATGTCACCTTGACATAGAAACAGGTCAGGGTTGGCGTTGTGAAGTCTGTCCTGACTATGATGTATGCAATGCTTGTTATAAAAAAGATGGAGGAATTGATCATCCTCATAAATTAACAAATCATCCTTCCATGGCTGATCACGATGCCCAGAACAAAGAGGCAAGGCAACTCCGGGTTCAGCAGCTGAGGAAAATGCTGGATCTTCTTGTGCATGCATCGCAATGCCGTTCTCCGCAATGCCAATATCCGAACTGTCGCAAAGTAAAGGGACTTTTCCGCCATGGCAATCAATGCAAAACACGAGCATCGGGTGGCTGTGTGCTTTGCAAGAAAATGTGGTATCTACTTCAACTCCATGCCCGGGCTTGTAAAGAATCTGATTGCCACGTACCACGTTGCAGAGATCTAAAAGAACATTTGAGGAGACTGCAGCAACAATCTGATTCACGGAGGAGGGCTGCTGTCATGGAGATGATGAGACAAAGAGCTGCCGAAGTAGCCAACAATGCTGAATGA 4881 0.429 MNMETLESRLQNLIRRSQANQNQQYQPLINSSSPNSMMIPTPGMQNMGNAGSAVTSSDASMISTSGCNNIGPNAVNYGVMYTTGGMHSDSLNGLLANGYQQSSAGFSNSSGGIMSSMGAQRNASQMIPTPGLNGSTSSSYMNLDSSINSQFSNVDSAVISHPYQQKLNVGGQNGRILQNIGGQMGAGIRSGLYRRPVGFPNGGLSNGVGLVGSNVQVTNESGTSEGYLSGPPYTSSPKSMQYHFEQHEEPILQGDSYRLSNVESFPSGSFCGAPASCVSEKNSDSTNQLNLPSLSKSSSVMGNQSNLQGTLQSAYQKSRTADQAAKLDLHASVSQRIDIVPSHQQCEQQCHQFQPQTNRCGHQQNHQQILRHLNHQHGTNSDILVHTDLLSDITSQGKSDHGLDHHKEGLKSHVTEHFHATMMQSQQNVSEKHSSSAHSFPYSRGQDGLSSSLPQNSQKMQQMFQAQQLDANSQHINCISVGGHSEPVLQVQWNSPIPELTHSNGNILPNQLLHEDFLRRISGKDEVQCNNFSSDRSTISQAVPSRALGVPRDVAGTIGRSASINQEKQFRNQQRWLLFLIHSRRCNAPEGKCAEHNCLTVQKLWKHIQNQNCNKSDCSYPRCHHTRVLLNHYRFCREPRCPVCVPVRAYHFKHRTHTTFQSAVPAAVNGSSKSSEIGDHLSRSISKPAEVFETSEDLQPSLKRIKLEQGMLNLIPKCESSALSVSTCSEPHISQESQHLDSLQHGLCLPVKTADVKTEFPIGSDQVDGQMNEDNVDSVCNQRCDGDSKELTCLVKQESIKMVEEFQEDRQENMRALENTAGTKSGKPKIKGVSLTELFTPEQVREHIAGLRRWVGQSKTKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCSTCGARIKRNAMYYTMGAGDTRHYFCIPCYNETRGDTILVDGSAIPKTRLEKKRNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYTQEVERGERKPLPQSVVLGAKDLPRTLLSDHIELRLFRKLKHERTERARLQGKSYEEVPGAEALVIRVVSSVDKKLEVKQRFLEIFQEENYPSEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECKFPNRRRVYLSYLDSVKYFRPEIKTVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKASKENIVVDLTNLYDHFFVSTGECKAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTTITKRALKASGQSELSGNASKDLLLMHKLGETICPMKEDFIMVHLQHACNHCCILMVAGHRWVCRQCKNFQMCDKCYEAEQTHEERERHPVNQREKHILCPVEINDLPADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNLCHLDIETGQGWRCEVCPDYDVCNACYKKDGGIDHPHKLTNHPSMADHDAQNKEARQLRVQQLRKMLDLLVHASQCRSPQCQYPNCRKVKGLFRHGNQCKTRASGGCVLCKKMWYLLQLHARACKESDCHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAE* 1627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00006 1626 Pfam TAZ zinc finger 574 644 IPR000197 -
Pte19g00006 1626 Pfam TAZ zinc finger 1518 1588 IPR000197 -
Pte19g00006 1626 MobiDBLite consensus disorder prediction 281 304 - -
Pte19g00006 1626 SUPERFAMILY RING/U-box 1308 1364 - -
Pte19g00006 1626 ProSiteProfiles Zinc finger ZZ-type profile. 1328 1391 IPR000433 GO:0008270
Pte19g00006 1626 Gene3D - 1447 1500 IPR043145 -
Pte19g00006 1626 SUPERFAMILY TAZ domain 564 650 IPR035898 -
Pte19g00006 1626 SUPERFAMILY FYVE/PHD zinc finger 952 993 IPR011011 -
Pte19g00006 1626 MobiDBLite consensus disorder prediction 423 455 - -
Pte19g00006 1626 Gene3D TAZ domain 559 651 IPR035898 -
Pte19g00006 1626 SUPERFAMILY RING/U-box 1429 1497 - -
Pte19g00006 1626 SMART TAZ_2 1511 1589 IPR000197 -
Pte19g00006 1626 SMART TAZ_2 567 647 IPR000197 -
Pte19g00006 1626 SMART PHD_3 893 992 IPR001965 -
Pte19g00006 1626 CDD PHD_HAC_like 919 991 - -
Pte19g00006 1626 ProSiteProfiles Zinc finger ZZ-type profile. 1448 1501 IPR000433 GO:0008270
Pte19g00006 1626 Gene3D - 1324 1378 IPR043145 -
Pte19g00006 1626 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1009 1446 IPR031162 GO:0004402
Pte19g00006 1626 ProSitePatterns Zinc finger ZZ-type signature. 1453 1480 IPR000433 GO:0008270
Pte19g00006 1626 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 944 992 IPR013083 -
Pte19g00006 1626 ProSiteProfiles Zinc finger TAZ-type profile. 565 647 IPR000197 -
Pte19g00006 1626 ProSiteProfiles Zinc finger TAZ-type profile. 1507 1591 IPR000197 -
Pte19g00006 1626 Pfam Zinc finger, ZZ type 1450 1483 IPR000433 GO:0008270
Pte19g00006 1626 Pfam Histone acetylation protein 1049 1281 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pte19g00006 1626 SUPERFAMILY TAZ domain 1510 1593 IPR035898 -
Pte19g00006 1626 FunFam Histone acetyltransferase of the CBP family 12 1324 1383 - -
Pte19g00006 1626 FunFam Histone acetyltransferase HAC1-like protein 1505 1622 - -
Pte19g00006 1626 SMART zz_5 1327 1371 IPR000433 GO:0008270
Pte19g00006 1626 SMART zz_5 1447 1493 IPR000433 GO:0008270
Pte19g00006 1626 SMART KAT11_2 1042 1340 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pte19g00006 1626 Pfam PHD-finger 950 993 IPR019787 -
Pte19g00006 1626 Coils Coil 3 23 - -
Pte19g00006 1626 PANTHER CBP/P300-RELATED 34 1617 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pte19g00006 1626 FunFam Histone acetyltransferase HAC1 1447 1498 - -
Pte19g00006 1626 ProSitePatterns Zinc finger PHD-type signature. 920 991 IPR019786 -
Pte19g00006 1626 Gene3D TAZ domain 1505 1622 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00006 Pte-Chr19 137279 149157 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pte19g00006 HAT_KAT11 3.6e-32 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00006 K04498 - qsa:O6P43_017846 2229.91