Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00003 ATGAGAATGCAGACTCATATTTCAGGACAAATGTCGGGACAGTTACCTAATCAAGTGGGTTCCCAGTTGGCAGGACCACCTCAGCCTAATGGAAATGCCCTACTCGCCCAGATACCAAATTTAGCCACTGTTCCTAGAACCACGTTTCCTGTGGATTCTGAAGTTGTTAGATCACGCACATACATGCAGGAGAAGATCTATGAGATTATAATGCGACGACATCAGCCAACAACTAATGAAATGCAAAGGAGGAGATTTAAGGATATCGTGAAGCGTGTAGAGGAGGGTCTTTTCAAGACTGCTACCAATATGGAGGATTATATGAACATGGAGACACTTGAGAGCCGTTTGCAGAATTTGATCAGGCGATCTCAAGCCAATCAGAACCAACAATATCAGCCATTGATTAATTCTTCTTCCCCAAAAAGCATGATGATACCCACCCCTGGAATGCAAAACATGGGAAATACCGGTTTAGCAGTTACATCTTCAGATGCTTCCATGATCTCCACCAGCGGATGCAATAATATAGCTCCTAATGCTGCCAATTATGGTGTCATGTATACTACTGGTGGTATGCAAAGCGACTCTCTCAATGATCCTTTGGCCAATGGATACCAGCAGTCCTCTGCAGGATTTTCAAATGGTTCTGGGAGGATTATGTCTTCAATGGATGTGCAACGAAATGCAAGCCAGATGATACCTACACCTGGGTTCAACGGCAGCACCAGTTGCTCGTACAAAAATTTAGATTCATCTATCAATAGTTGTCAATTTTCAAATGTGGATTCTGCTGCAATATCCCATCCATATCAGCAAAAGCTGAATGTTGGTGGACAGAATGGCCGCATATTGCAGAACATTGGCGGCCAAATGGGTGCAGGCATTAGATCTGGCTTACATCGGAGGCCGGTTGGTTTTCCAAATGGAGGTCTAAGTAATGGTGTGGGACTAGTAGGAAGCAATGTGCAAGTAACGAATGAATCTGGAACTTCTGAAGGTTATCTTAGTGGGCCACCCTATACTGGTTCCCCTAAATCTATGCGGTACCATTTTGTGCAACACGAGGAACCAATATTACAAGGTGATAGTTATAGGTTGAGCAATGTTGAGTCTTTTCCTTCTGGAAGCTTCTGTGGTGCTCCAGCATCCTGCAGATCTGAGAAGAATTCTGATAGCACAAATCAATTAAATTTGCCATCTTTGTCAAAGAGCAGTTTTGTAATGGAGAATCAGTCCAATCTCCAGGGAACACTGCAGTCTGCCTATGAAAAGTCTCGAATAGCTGATCAGTCAGAGAAGTTGGATTTACACTCATCAATATCTCAGAGGAACGACATTGTTCCCTCTCATCAACAATATGAGCAGCAGTTCCATCATAAAGCAGGTCATCAGCAGAATCACCAACAGATATTGCAAGATTCAAACCACCAACATGGCATCAATAGTGACATTTTGGTTCACACAGATCTATGGTCTGACATTACTAGTCAAGTAAAGTCTGATCCTGGTTTGGACCGTCATAAAGAAGGCCCAAAATCACATGTCACTGAGGACTTCCAGGCAACCATGATGCAGTCTCACCAAAACTTATACGAAAAACACTCCAGCACTGCCCATAGTTTTCCATATTCATGTGGACAGGATGGTTTGTCTTCATCACTGCCACAAAATTCTCAACAAATGCAACAAATGTTTGAGGCACAACAACTTGATACTGATTCTCAACATATCAACTGCATTTCTGTTGGAGGACATTCTGAGCCGGTGCTTCAGGGTCAATGGACCTCTCAAATATCAGAATTAACTCATTCAACTGAGAACATCTTTCCTAATCAGCTTCTGCATGAAGATTTTCTTCAAAGGATATCAGGAAAAGATGAAGTCCAGTGCAATAATTTGTCATCTGATAGATCTACTATCAGTCAAGCAGTTCCTTCAAGAGCTTTGGGTGTTCCTCGGGATGTAGCTGACACTATCGGTAGATCTGCTAGCATAAACCAGGAAAAACAATTTCGCAACCAACAGCGATGGCTCTTATTCTTAATTCACGCACGCCGATGTAATGCCCCAGAAGGAAAATGTGCAGAGCATAATTGTTTGACTGTTCAGAAGTTGTGGAAACACATTCAAAATCAGAATTGCAACAAGTCTGATTGCTCATACCCACGTTGTTATCATACAAGAGTCTTGCTTAATCATTACAGATTTTGCAGGGAGCCTCGTTGTCCCGTTTGTGTTCCTGTTAGAGTCTATCATTTTAATAACCGCACCCGTACAACTTTTCATTCTGTAGTACCTGCTGCAGTAAATGGATCCTCAAAATCCTCTGAAATTGGAGATCACTTAGGCAGATATATTTCAAAGCAGACCCAAGTTTTTGAAACTTCAGAAGATCTTCAACCATCCTCGAAACGCATAAAACTTGAGCAGGGTTCGCAAAATCTTATCCCCAAGTGTGAAAGCTCTGCTTTATCAGTCTCCACTTGTAGCGAACCTCATATTTCCCAGGAAAGCCAGCACCTGGATTCGTTACAACATGGATTGTGCTTGCCAGTTAAAACAGCGGATGTGAAGACAGAGTTTCCAATTGGTTCTGACCAAGTGGATGGCAGGATGAATGAGGACAATGTAGACAGTGTTTTTAAACAAAGATGTGATGGTGATTCTAAAGAACTTACCTGCTTGGTTAAGCAGGAAAGTATCAAAATGGTAAAGGAATTTCAAGATGGACAAGAAAACATGAGAGAGGCACTGGAAAACACAGCAGGAACAAAGTCCGGTAAGCCCAAAATAAAGGGAGTGTCCCTGACTGAACTTTTTACTCCGGAGCAAGTTAGAGAGCATATTACTGGTCTTCGGCGATGGGTTGGGCAAAGTAAAGCAAAGGCGGAGAAAAATCAAGCAATGGAGCACTCGATGAGTGAGAACTCCTGTCAATTATGTGCAGTTGAGAAGCTCACTTTTGAACCACCACCTATTTATTGCTCAACATGCGGGGCTCGCATTAAAAGAAATGCAATGTATTATACTATGGGAGCTGGTGATACCCGGCACTATTTTTGCATCCCATGCTACAATGAGACTCGTGGGGATACTATCCTTGTTGACGGGTCTGCAATTTCCAAAACCAGGATGGAAAAAAAGAGAAATGATGAGGAGACTGAGGAATGGTGGGTTCAATGTGATAAGTGCGAAGCTTGGCAACATCAAATCTGTGCTTTGTTTAATGGTAGAAGGAATGATGGTGGACAAGCTGAGTACACTTGCCCAAACTGCTATACTCAAGAGGTTGAGAGAGGAGAACGAAAGCCCTTGCCACAGAGTGCAGTTCTTGGAGCCAAAGACTTGCCAAGAACGCTTCTGAGTGACCATATAGAGCAGCGATTATTTAGGAAACTAAAGCACGAAAGGACTGAGAGGGCAAGGCTCCAAGGAAAAAGTTATGAGGAGGTTCTTGGTGCTGAAGCACTTGTTATAAGAGTTGTTTCATCTGTTGACAAGAAGTTGGAAGTGAAGCAGCGGTTCCTGGAAATTTTCCAAGAAGAAAACTATCCATCAGAATTTCCGTACAAGTCCAAGGTGATTTTGTTGTTCCAGAAGATTGAAGGGGTGGAAGTTTGCTTATTTGGCATGTATGTTCAAGAGTTTGGATCTGAATGTCAATTTCCCAACCAGCGCCGAGTTTATCTTTCATACCTCGACTCTGTAAAGTATTTTAGACCTGAGGTTAAAACAGTGACTGGAGAGGCGCTCCGAACATTTGTTTACCATGAAATTTTAATTGGATACCTGGAGTATTGTAAGAAAAGAGGTTTCACGAGCTGCTATATATGGGCATGCCCTCCATTAAAGGGGGAAGATTATATACTATATTGTCATCCAGAAATTCAGAAAACACCAAAATCTGACAAGCTCCGAGAATGGTACTTATCCATGTTAAGGAAAGCATCGAAGGAGAATATTGTTGTTGATCTTACTAATTTATATGACCATTTCTTTATATCTACCGGTGAATGTAAGGCTATGGTGACTGCATCTAGACTCCCATATTTTGATGGTGATTACTGGCCTGGTGCTGCAGAGGATCTAATATATCAACTTCGTCGAGAAGAAGATGGAAGAAAACAAAATAAGAAAGGAACAATAAAGAAGACCACCATAACCAAGAGGGCTCTAAAAGCATCCGGTCAGTCTGAACTTTCTGGGAATGCTTCAAAGGATCTGCTTTTGATGCACAAACTTGGTGAAACCATTAACCCAATGAAGGAAGATTTTATCATGGTTCATTTGCAGCATGCATGTAACCACTGTTGTATTCTCATGGTAACTGGAAACCGATGGGTGTGCCGTCAGTGCAAAAATTTTCAGCTTTGTGACAAATGTTATGAAGCTGAATTAAAGCACGAGGAAGGAGAAAGACATCCGATCAATCAGAGGGAGAAGCATACTCTTTATCCTGTAGAAATTAATGATGTACCTGCTGATACAAAAGACAAAGATGAGATTCTGGAAAGTGAATTCTTTGACACTAGACAGGCATTTCTTAGTCTCTGTCAAGGGAACCATTACCAGTACGATACTCTACGGCGTGCAAAACATTCCTCAATGATGGTCCTCTATCATCTTCATAATCCAACTGCTCCAGCATTCGTCACACCATGTAATTTGTGTCACCTTGACATAGAAACGGGTCAGGGTTGGCGTTGTGAAGTCTGTCCTGACTATGATGTATGCAACGCTTGTTATAAAAGAGATGGAGGAATTGATCATCCTCATAAATTAACAAACCATCCGTCCATGGCTGATCGTGATGCCCAGAACAAAGAGGCAAGGCAACTTCGAGTTCAGCAGCTGAGGAAAATGCTGGATCTTCTTGTGCACGCATCACAATGCCGTTCTCCGCAATGCCAATATCCAAACTGTCGGAAAGTAAAAGGGCTTTTCCGACATGGCATACAATGCAAAACACGAGCATCTGGTGGCTGTGTGCTTTGCAAGAAAATGTGGTATCTTCTTCAACTTCATGCACGTGCCTGCAAAGAATCCGAGTGTCACGTACCACGTTGCAGAGATCTAAAAGAACATTTGAGGAGACTGCAGCAACAATCTGATTCACGGAGAAGAGCTGCTGTGATGGAGATGATGAGACAGAGAGCTGCGGAAGTAGCCAACAATGTTGGATGA 5187 0.4236 MRMQTHISGQMSGQLPNQVGSQLAGPPQPNGNALLAQIPNLATVPRTTFPVDSEVVRSRTYMQEKIYEIIMRRHQPTTNEMQRRRFKDIVKRVEEGLFKTATNMEDYMNMETLESRLQNLIRRSQANQNQQYQPLINSSSPKSMMIPTPGMQNMGNTGLAVTSSDASMISTSGCNNIAPNAANYGVMYTTGGMQSDSLNDPLANGYQQSSAGFSNGSGRIMSSMDVQRNASQMIPTPGFNGSTSCSYKNLDSSINSCQFSNVDSAAISHPYQQKLNVGGQNGRILQNIGGQMGAGIRSGLHRRPVGFPNGGLSNGVGLVGSNVQVTNESGTSEGYLSGPPYTGSPKSMRYHFVQHEEPILQGDSYRLSNVESFPSGSFCGAPASCRSEKNSDSTNQLNLPSLSKSSFVMENQSNLQGTLQSAYEKSRIADQSEKLDLHSSISQRNDIVPSHQQYEQQFHHKAGHQQNHQQILQDSNHQHGINSDILVHTDLWSDITSQVKSDPGLDRHKEGPKSHVTEDFQATMMQSHQNLYEKHSSTAHSFPYSCGQDGLSSSLPQNSQQMQQMFEAQQLDTDSQHINCISVGGHSEPVLQGQWTSQISELTHSTENIFPNQLLHEDFLQRISGKDEVQCNNLSSDRSTISQAVPSRALGVPRDVADTIGRSASINQEKQFRNQQRWLLFLIHARRCNAPEGKCAEHNCLTVQKLWKHIQNQNCNKSDCSYPRCYHTRVLLNHYRFCREPRCPVCVPVRVYHFNNRTRTTFHSVVPAAVNGSSKSSEIGDHLGRYISKQTQVFETSEDLQPSSKRIKLEQGSQNLIPKCESSALSVSTCSEPHISQESQHLDSLQHGLCLPVKTADVKTEFPIGSDQVDGRMNEDNVDSVFKQRCDGDSKELTCLVKQESIKMVKEFQDGQENMREALENTAGTKSGKPKIKGVSLTELFTPEQVREHITGLRRWVGQSKAKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCSTCGARIKRNAMYYTMGAGDTRHYFCIPCYNETRGDTILVDGSAISKTRMEKKRNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYTQEVERGERKPLPQSAVLGAKDLPRTLLSDHIEQRLFRKLKHERTERARLQGKSYEEVLGAEALVIRVVSSVDKKLEVKQRFLEIFQEENYPSEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKTVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKASKENIVVDLTNLYDHFFISTGECKAMVTASRLPYFDGDYWPGAAEDLIYQLRREEDGRKQNKKGTIKKTTITKRALKASGQSELSGNASKDLLLMHKLGETINPMKEDFIMVHLQHACNHCCILMVTGNRWVCRQCKNFQLCDKCYEAELKHEEGERHPINQREKHTLYPVEINDVPADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTPCNLCHLDIETGQGWRCEVCPDYDVCNACYKRDGGIDHPHKLTNHPSMADRDAQNKEARQLRVQQLRKMLDLLVHASQCRSPQCQYPNCRKVKGLFRHGIQCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNVG* 1729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00003 1728 SUPERFAMILY TAZ domain 1612 1695 IPR035898 -
Pte19g00003 1728 FunFam Histone acetyltransferase HAC1-like protein 1607 1724 - -
Pte19g00003 1728 Pfam Histone acetylation protein 1155 1394 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pte19g00003 1728 ProSiteProfiles Zinc finger TAZ-type profile. 667 749 IPR000197 -
Pte19g00003 1728 MobiDBLite consensus disorder prediction 1 29 - -
Pte19g00003 1728 Pfam TAZ zinc finger 1620 1690 IPR000197 -
Pte19g00003 1728 Pfam TAZ zinc finger 676 746 IPR000197 -
Pte19g00003 1728 SUPERFAMILY RING/U-box 1410 1484 - -
Pte19g00003 1728 ProSiteProfiles Zinc finger ZZ-type profile. 1550 1603 IPR000433 GO:0008270
Pte19g00003 1728 Gene3D - 1426 1485 IPR043145 -
Pte19g00003 1728 PANTHER CBP/P300-RELATED 85 1719 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pte19g00003 1728 SMART zz_5 1429 1471 IPR000433 GO:0008270
Pte19g00003 1728 SMART zz_5 1549 1595 IPR000433 GO:0008270
Pte19g00003 1728 SUPERFAMILY FYVE/PHD zinc finger 1054 1095 IPR011011 -
Pte19g00003 1728 FunFam Histone acetyltransferase of the CBP family 12 1426 1485 - -
Pte19g00003 1728 SUPERFAMILY RING/U-box 1531 1599 - -
Pte19g00003 1728 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1111 1548 IPR031162 GO:0004402
Pte19g00003 1728 ProSitePatterns Zinc finger PHD-type signature. 1022 1093 IPR019786 -
Pte19g00003 1728 Gene3D - 1549 1601 IPR043145 -
Pte19g00003 1728 Pfam Zinc finger, ZZ type 1431 1468 IPR000433 GO:0008270
Pte19g00003 1728 Pfam Zinc finger, ZZ type 1553 1585 IPR000433 GO:0008270
Pte19g00003 1728 ProSiteProfiles Zinc finger ZZ-type profile. 1430 1493 IPR000433 GO:0008270
Pte19g00003 1728 CDD PHD_HAC_like 1021 1093 - -
Pte19g00003 1728 SMART TAZ_2 669 749 IPR000197 -
Pte19g00003 1728 SMART TAZ_2 1613 1691 IPR000197 -
Pte19g00003 1728 SMART KAT11_2 1144 1442 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pte19g00003 1728 SUPERFAMILY TAZ domain 666 752 IPR035898 -
Pte19g00003 1728 Pfam PHD-finger 1052 1095 IPR019787 -
Pte19g00003 1728 FunFam Histone acetyltransferase HAC1 1549 1600 - -
Pte19g00003 1728 ProSiteProfiles Zinc finger TAZ-type profile. 1609 1693 IPR000197 -
Pte19g00003 1728 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1046 1094 IPR013083 -
Pte19g00003 1728 Gene3D TAZ domain 1607 1724 IPR035898 -
Pte19g00003 1728 Coils Coil 110 130 - -
Pte19g00003 1728 ProSitePatterns Zinc finger ZZ-type signature. 1555 1582 IPR000433 GO:0008270
Pte19g00003 1728 SMART PHD_3 995 1094 IPR001965 -
Pte19g00003 1728 Gene3D TAZ domain 661 753 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00003 Pte-Chr19 46050 59480 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pte19g00003 HAT_KAT11 7.5e-32 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00003 K04498 - qsa:O6P43_017846 2314.26