Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02153 ATGGTTTCTTTGCCTTCTGCACCAGTCATTCCGCTAACAACAACAATTAGCATTCGGTACCAGTCCAACAGCTTCAACCTTGTCAATTTAGGTCAGATTGTTAATTCATGTGTGTTTCCCAAGAAGCAGAGAGAATTTGTCTGTGCTTGTGTGGCGCCACCTCAAAGCTTGAGAAGAGAGGAGTCTTCTGCAATTGGGCTCAATGGTTTGTCTGAATCAGAGGTTTTAGGCACTGTAAGGGATCTTGAGGATGATTCTGATGTTCTCATAGAGTGTAGAGATGTCCACAAGTCCTTTGGTGAGAAGCAGATTCTTAACGGGGTGAGCTTTAAGATAAGATACGGAGAAGCAGTTGGAATAATTGGTCCCTCTGGGACAGGTAAATCTACAATTCTCAAGATAATTGCAGGGCTTCTTGCTCCAGACAAGGGTGAAGTTTACATTCGAGGTAGAAAGAGATCTGGCTTGATCAGCGATGAGGAGATGCATGGTGTTAGAATTGGATTGGTTTTCCAAAGTGCGGCACTTTTTGATTCTCTCACTGTCCGTGAAAATGTTGGTTTTCTTTTGTATGAACACTCAAGCATGTCCCAGAATCAGATTTCAGAACTTGTGAAGGAAAGTTTGGCAGCAGTTGGTTTAAAAGGAGTGGAGGATCGTCTACCTTCAGAATTATCTGGCGGAATGAAAAAAAGGGTTGCTCTTGCTCGTTCTATAATATATGATACAACAAAGGATATAATAGAACCAGAGGTACTTTTGTACGATGAGCCAACTGCTGGCCTAGATCCTATTGCATCTACTGTAGTTGAGGATCTTATTCGATCTGTTCATGTAAAAGGTCAAGATGCACTAGGTAATCCTGGGAAAATTGCGTCCTATGTTGTTGTAACTCACCAACACAGTACCATTAAAAGAGCCATCGACAGGTTGTTGTTTTTGCACAAGGGCAAGCTTGTTTGGCAAGGAATGACCCACAAATTTACAACATCAACTAATCCAATTGTTCGGCAGTTTGCATCTGGAAGCCTTGACGGGCCAATCAAATATTAG 1053 0.4207 MVSLPSAPVIPLTTTISIRYQSNSFNLVNLGQIVNSCVFPKKQREFVCACVAPPQSLRREESSAIGLNGLSESEVLGTVRDLEDDSDVLIECRDVHKSFGEKQILNGVSFKIRYGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRSGLISDEEMHGVRIGLVFQSAALFDSLTVRENVGFLLYEHSSMSQNQISELVKESLAAVGLKGVEDRLPSELSGGMKKRVALARSIIYDTTKDIIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHVKGQDALGNPGKIASYVVVTHQHSTIKRAIDRLLFLHKGKLVWQGMTHKFTTSTNPIVRQFASGSLDGPIKY* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02153 350 SMART AAA_5 114 318 IPR003593 GO:0016887
Pte18g02153 350 Pfam ABC transporter 105 260 IPR003439 GO:0005524
Pte18g02153 350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 329 IPR027417 -
Pte18g02153 350 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 90 341 IPR003439 GO:0005524
Pte18g02153 350 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 14 350 - -
Pte18g02153 350 ProSitePatterns ABC transporters family signature. 225 239 IPR017871 GO:0005524|GO:0016887
Pte18g02153 350 CDD ABC_Org_Solvent_Resistant 90 339 - -
Pte18g02153 350 Gene3D - 78 341 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02153 Pte-Chr18 31461775 31469796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02153 103 334 Calmodulin-binding Proteins AT2G36910 29.150 5.63e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02153 - - qsa:O6P43_007747 533.872