Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02152 ATGCTTTTGTATTGCCTGAATTTTCAGGATGATGGGTCTCCTGTCTCAGTTTTTATCCTCTCTGGGAGTAATGCTCAAGATGGACATTTAGTCGCTGGTCGTAATGGTGTGAAGCGTCTCCGAACTGTAAGGCATCCAAACATTTTATCGTTTCTTCACAGTACTGAAACCGAAACTTTTGAAGGTAGCTCTACCAAGGTTACTATCTACATTGTAACTGAACCTGTCATGCCACTATCTGAGAAAATTAAAGAGTTGGGGCTAGAAGGTACGCAAAGGGATGAATATTTTGCATTGGGCCTGCATCAGATAGCCAAAGCTGTGAGCTTTTTGAATAATGATTGTAAACTCGTTCATGGTAATGTTTGCTTGGCTAGTGTCGTTGTCACTCAAACATTGGATTGGAAGCTGCATGCTTTTGATGTGCTATCCGAGTTTGATGGGAATGATGGAACTTCTACTGTGCCAATGCTGCAATATGCTTGGCTTATTGGTTCACAATACAAACCAATGGAATTGTCAAAATCAGACTGGGATGCAGTTAGGAAGTCTCCTCCATGGGCCATTGATTCTTGGGGATTGGGGTGTCTTATCTATGAGCTGTTCTCTGGAATGAAGCTGATGAAAACAGAAGAGTTGCGGAATACTGCTACCATTCCAAAGTCTCTGCTTCCAGATTATCAGCGGCTCCTAAGTTCCATGCCTTCTCGTAGGTTGAATGCATCAAAACTTATAGAGAACAGTGAATATTTCCAAAATAAGCTAGTAGACACTATCCATTTTATGGAAATTCTTACATTGAAAGATAGCGTTGAAAAAGATACTTTCTTCCGAAAGCTTCCAACTTTGACTGAACAGCTTCCACGCCAGATTGTGCTAAAGAAGTTACTTCCTTTACTAGCTTCTGCCCTTGAATTTGGTTCGGCTGCTGCCCCTGCTTTGACTGCACTACTGAAAATGGGTTCTTGGCTTTCTCCTATGGAATTCAGCGCCAAGGTGCTGCCCACTATTGTTAAACTTTTTGCTTCTAATGACCGAGCTGTTCGTGTTGCCCTACTCCAACACATAGATCAATTTGGAGAGTCGTTATCTGCTCAAATTGTTGATGAGCAAGTTTATCCACATGTTGCCACTGGGTTCTCTGACACATCTGCTTTTCTACGGGAGCTGACTCTCAAGTCCATGCTTGTCCTGGCTCCCAAGCTCTCTCAACGGACCATCTCAGGATCCATATTGAAGTATTTATCAAAGCTACAGGTAGTTGACGAAGAACCAGCAATTAGAACCAACACAACTATCTTACTTGGGAATATTGCAAGCCACCTGAATGAAGGCACAAGAAAAAGGGTACTGATCAATGCGTTTACTGTCCGGGCACTTCGTGACCCTTTTGGCCCTGCCAGAGGAGCAGGGATTATGGCTTTATGTGCAACCAGTTCATATTACGATATTACAGAAGTTGCAACCCGTATTCTTCCATCTATTGTAGTTCTTACGATTGATCCTGACAGTGATGTTCGATCTAAGGCTTTTCAAGGTGTTGATCAATTTTTGCAGATGGTCAAGCAACATTATGAAAAGGTAAATACAGACACAAATGGGACTGCAAGCATGGGGATCCCATCCGTACATGGAAATGCTAGTTTACTTGGATGGGCTATGAGCTCCTTGACATTGAAGGGTAAAACTTCTGATAATATTCAAGTTGCTGCTGCAACTTCCAGTGCAACCCTCACTTCTTCATCTTTGAATGCCAGCTATGACACTCCATCTACAGCACCTGTCAGTGTAGATTCTACCCCAGATTTTACTGAGCACCCTGCACCCGTTTCCCCTACATCTACTGATGGCTGGGGAGAACTTGAGAATGGATTGCAGGAAGAGCATGAAAATGACAAGGATGGATGGGACGATCTTGAACCAATCGAACAGCCAAAGCCATCCCCAGCTCTTGCAAATATCCAAGCTGCTCAGAAGCGGCCTGTCTCACAACCTGCTTCGCAAATTAAACAAGGTACAATCTTGAAGGTGAAAAGTGCAGCAAATGTAAACAAAAACAATGATGAAGATTTGTGGGGTTCCATAGCAGCCCCTGCTCCGAAGACAACGTCAAAATCTTTAAATGTTAGGTCAAGTGGAGCTGACGATGATGATCCGTGGGCGGCCATTGCTGCTCCTGCACCTGTAACGAGAGCAAAACCTCTATCCTCCAGCAGAGGTCGGGGAGCAAAACCCTCAATATCAAAACTTGGTGCACAGAGGATCAACCGCACCTCTTCTTCAGGGATGTGA 2292 0.438 MLLYCLNFQDDGSPVSVFILSGSNAQDGHLVAGRNGVKRLRTVRHPNILSFLHSTETETFEGSSTKVTIYIVTEPVMPLSEKIKELGLEGTQRDEYFALGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFDGNDGTSTVPMLQYAWLIGSQYKPMELSKSDWDAVRKSPPWAIDSWGLGCLIYELFSGMKLMKTEELRNTATIPKSLLPDYQRLLSSMPSRRLNASKLIENSEYFQNKLVDTIHFMEILTLKDSVEKDTFFRKLPTLTEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSPMEFSAKVLPTIVKLFASNDRAVRVALLQHIDQFGESLSAQIVDEQVYPHVATGFSDTSAFLRELTLKSMLVLAPKLSQRTISGSILKYLSKLQVVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDPFGPARGAGIMALCATSSYYDITEVATRILPSIVVLTIDPDSDVRSKAFQGVDQFLQMVKQHYEKVNTDTNGTASMGIPSVHGNASLLGWAMSSLTLKGKTSDNIQVAAATSSATLTSSSLNASYDTPSTAPVSVDSTPDFTEHPAPVSPTSTDGWGELENGLQEEHENDKDGWDDLEPIEQPKPSPALANIQAAQKRPVSQPASQIKQGTILKVKSAANVNKNNDEDLWGSIAAPAPKTTSKSLNVRSSGADDDDPWAAIAAPAPVTRAKPLSSSRGRGAKPSISKLGAQRINRTSSSGM* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02152 763 Gene3D - 249 531 IPR011989 -
Pte18g02152 763 SMART serkin_6 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g02152 763 ProSiteProfiles HEAT repeat profile. 333 371 IPR021133 -
Pte18g02152 763 Gene3D Phosphorylase Kinase; domain 1 3 74 - -
Pte18g02152 763 SUPERFAMILY ARM repeat 260 525 IPR016024 -
Pte18g02152 763 MobiDBLite consensus disorder prediction 579 647 - -
Pte18g02152 763 MobiDBLite consensus disorder prediction 606 620 - -
Pte18g02152 763 MobiDBLite consensus disorder prediction 692 763 - -
Pte18g02152 763 MobiDBLite consensus disorder prediction 622 641 - -
Pte18g02152 763 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g02152 763 Gene3D Transferase(Phosphotransferase) domain 1 77 246 - -
Pte18g02152 763 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 11 741 - -
Pte18g02152 763 SUPERFAMILY Protein kinase-like (PK-like) 11 254 IPR011009 -
Pte18g02152 763 MobiDBLite consensus disorder prediction 579 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02152 Pte-Chr18 31442745 31457718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02152 37 258 MAP Kinase Kinase Kinase AT5G66850 26.068 5.21e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Pte18g02152 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02152 K08876 - rcu:8259557 1191.79