Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02151 ATGGAACCCAGTGAAAACCAGCTCAGCTCCTTCTATCCTCAGCAACAACAGCAGATCCACCCTCATCACCAGCAACAACACCTGCAGCTGAGTCCTACCACCACCCATAACATCACACCGTCCATCGCTGCTTCCCCCACCAATGGACTCTTACCAAACGCAGAAGGGTCCCACTTGGTCTACCCTCACTCTGTGCCTTCTGCTGTTTCATCCCAGCAAGAGTCTGTCAAGAGAAAGAGAGGGAGACCCAGAAAATATAATACCCCAGAACAAGCTTTGGCAGCCAAGAAAGCAGCAACTGCCGCAGCCCCGTCATCGTCGCATTCATTTTCTACCACGAACAAAAAGGGCCATATCTTTGCCGGTGGTTCTGGTGCTTTTACTTTTACCGGAGCTTACAAGAAATCGCAACCATTTTCTGTAGGCAACTCAGGACAAGGTTTCATGCCGCATGTCATAAGTGTAGCGGCTAATGAGGATGTTGGTCAGAAAATTATGACGTTTATGCAACAAAGTAAACGTGAAATATGCATCTTATCTGCTTCTGGTTCAATCTCTAATGCCTCTCTTCGCCAGCCAGCAACATCAGGAGGCAACATTACATATGAGGGTCTATTTGATATTATTACACTCTCCGGTTCATATGTGCGTACCGAGTTTGAAGGGAGGACAGGCGGTCTTAGTGTATGCCTATCTAGTACGGACGGCCAGATGATAGGAGGAGGGGTTGGTGGACCCCTAAAAGCTGCAGGCCCAGTACAAGTTATCGTTGGCACGTTTTTGATGGACACGAAGAAGGATAGTGGTGTAAAAGGTGATGCTTCTGTGAGCATGGTGCCATTAGAAGTCGGGGGTGAATCGATGTCAAATGTAGGTATCCATTCTCTAGTTGATCCTTCTAGAGCATCAGTGAGGGGAAATGAAGATCATCAAGCTATTGGATCCCGCCACTTCATGACTCAACCACAGAGTGCCCAGGTGAGTCCGGGACCCACTGATTGGGGAGGATATGTAGATGCCAGAAGTTCAGGTGGCTATGAACTGACAGGTAGAACAGATCATGTAGCACACCAATCTCCAGAAGATGGGGACTATGACCAGATTCCAGACTGA 1113 0.4816 MEPSENQLSSFYPQQQQQIHPHHQQQHLQLSPTTTHNITPSIAASPTNGLLPNAEGSHLVYPHSVPSAVSSQQESVKRKRGRPRKYNTPEQALAAKKAATAAAPSSSHSFSTTNKKGHIFAGGSGAFTFTGAYKKSQPFSVGNSGQGFMPHVISVAANEDVGQKIMTFMQQSKREICILSASGSISNASLRQPATSGGNITYEGLFDIITLSGSYVRTEFEGRTGGLSVCLSSTDGQMIGGGVGGPLKAAGPVQVIVGTFLMDTKKDSGVKGDASVSMVPLEVGGESMSNVGIHSLVDPSRASVRGNEDHQAIGSRHFMTQPQSAQVSPGPTDWGGYVDARSSGGYELTGRTDHVAHQSPEDGDYDQIPD* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02151 370 MobiDBLite consensus disorder prediction 319 370 - -
Pte18g02151 370 MobiDBLite consensus disorder prediction 1 52 - -
Pte18g02151 370 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 29 279 IPR039605 GO:0003680
Pte18g02151 370 MobiDBLite consensus disorder prediction 1 112 - -
Pte18g02151 370 CDD DUF296 150 260 IPR005175 -
Pte18g02151 370 ProSiteProfiles PPC domain profile profile. 144 284 IPR005175 -
Pte18g02151 370 Pfam Plants and Prokaryotes Conserved (PCC) domain 150 260 IPR005175 -
Pte18g02151 370 Gene3D - 150 273 - -
Pte18g02151 370 SUPERFAMILY AF0104/ALDC/Ptd012-like 148 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02151 Pte-Chr18 31423331 31428208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02151 60 371 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 51.198 1.65e-79 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02151 - - qsa:O6P43_007692 449.514