Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02126 ATGTATCTTCGCTTTCGTTGTAAAGGTACTGGAGAGTCGAGATTAACGGGGAAAAGCAAAAAACCTCTTCGTTCAGAAACTGACAAGCATGGCATACTTGGTACTGCAATGCAACATGATGAAGTGATTATTGGCTGTGGTGGGACCGTTTATATAAAGCTAGCACAGAGTCAAATTGCAGAAAAGGATGAATTGTCAGTCCTGCTGGAGCTGAAATCTGGTCTTGTTGATCCTCTGAATTACTTGAAAGATTGGCAAATCCCCAGCAATGTGACCAAAACAAACGAAGCTTTACCTCATTGCAAGTGGACTGGAGTTGTCTGCAACTCGGAAGGTTTTGTAGAAGGCCTGGACCTCTCCAACATGAATCTCAGTGGAAAGGTGTCAGACAGCATCCGGGACCTGACAGCTCTTTCGTCGCTTAACATATGTAGCAACGCATTTGCTTCATCATTGCCAGAATCGCTTTCAAATCTCACCATGCTAAAGAGCATTGATGTGAGTGATAATTACTTTATTGGTAACTTCCCTACTGGTCTTGGAAGAGCAAAAGGACTGACATCAGTTAATGCATCTAGCAATAATTTCCAAGGTCTTCTTCCTGAGGATCTCGGAAATGCAACATCGCTTGAGAGCATTGATTTTAGAGGGAGCTACTTTGAAGGTTCCATTCCCAAGTCCTTCAAGAATCTGAAGAAGCTGAAATTTCTTGGCCTTTCAGGCAATAACTTTACTGGCAAGATTCCAGGAGAGATTGGTCAGCTCGCTTCTCTGGAAACATTAATTATTGGATACAATGAGTTTGAAGGAGAAACACCAACAGAGTTTGGCAAGCTTACCAATCTTAAGTACCTCGACTTGGCCGTAGGTAATCTCAGTGGTCAGATTCCACGCGAACTCGGTATGCTGAAAAATCTGACTACAGTTTATTTATACAAGAACAATTTTACAGGTCATATACCATATGAGTTTGGAAATATTACCTCACTGGTATTTTTGGACCTCTCTGACAATCAGATTTCCGGAGAGATTCCACAGGAGCTCGGCAATTTGCAAAATCTGCAGCTCTTGAATCTAATGTGCAATCGATTCACTGGTCCTATCCCAGAAAAGATTGGTCAGTTGAGAAAGTTAGAGGTACTTGAGCTTTGGAAAAATTCATTGGTCGGTCCTTTGCCAAAGAACTTAGGGAAGAACTCTCCTTTGCAATGGTTAGATGTTTCATCAAATTCACTGTCTGGTGAGATTCCTCCAGGTTTGTGTAATTCTGGCAATCTCACCAAACTCATTCTGTTTGACAATGCATTCTCCGGTTCTATGCCACTAGGCCTGTCTACTTGTGTGTCATTGGTTCGAGTTAGGATTCAAAACAATCTTATTTCTGGGACCATTCCCGTTGGATTTGGAAATCTTCCTAGTCTTCAAAGATTGGAGTTGGCCAAGAACAATCTCACTGGCCAAATTCCTATTGATATTGCTTCCTCTATGTCACTTTCTTTTATTGATGTATCTTGGAACCACCTGGATTCATCTCTGCCTTCTAGCATTCTTTCCACTCCAAACCTTCAAACCTTCATTGCTTCAAACAACAATTTTGGGGGTACTATTCCACAGGACTTTCTAGACTGTCTTTCACTCTCTGTGCTCGATCTTTCAAATAACCATATCTCTGGAAAAATCCCTGAAAGCATTGCTTCTTGCGGAAAGCTGGTCAATGTGAATCTTCGGAACAACAGGTTAACAGGGGAAATTCCAAAGGCAATCACAACAATGCCCAGTTTGGCTGTTCTCGATTTGTCTAACAACTCTCTGCTAGGTAGAATTCCTGAAACCTTTGGAAGTTCTCCAGCTCTGGAGACGCTCAACCTGTCATACAACAAGCTTGAAGGTCCTGTACCTAGAAATGGCGTTTTGACAACAATAAACCCTTATGATCTCACTGGGAATGCTGGACTTTGTGGAGGAATTCTTCCTCCATGTTCTCAAGGTTTAACAGCATTAAAGCAGCAAAGGAACTCGCACCTCAAACATGTAATACTCGGCTTTGTTGTCGGGATTTCAGTGATTTTATCTCTTGGTTTGATGTATTTTGCTAGTAGATGGTTGTACGGAAGATGGTACGTATATAGCAGCTTCTTACATAATTGGTTCAGAAGCAGCAATGAAGAATGGCCATGGAGATTGGTAGCATTTCAAAGGGTTAGTTTCAGTAGCAGTGATATTCTAGCATCTGTGATGGAGTCCAATATCATAGGCATGGGTGGTACTGGCATCGTTTACAAAGCAGAAGTCCATAGACCATATGGAACTGTGGCAGTGAAGAAGCTATGGAAGACAGGAACTGATATTGAAAATAACAGTGATTTATTAAGAGAAGTAGATCTTCTAGGGAGACTGAGGCATAGAAACATTGTTAGGCTGTTGGGGTATCTTCATAATGAATCAGATGTTATGATGGTCTATGAGTACATGCCTAATGGAAACCTCGGCACAGCCCTGCATGGTAGACAGACAGGCAAGTTGTTGGTAGATTGGGTTTCACGATACAATATAGCAGTTGGAGTTGCCCAAGGGTTGAATTACCTCCACAACGACTGCTACCCCTCTGTTATTCATCGGGATATTAAGTCTAATAATATTCTTCTTGATGAAAATATGGATGCAAGGATAGCAGATTTTGGTTTGGCAAGAATGATGCTTCACAAAAATGAGACGGTTTCAATGGTGGCTGGATCCTATGGATATATAGCACCAGAATATGGCTACACTTTGAAGGTTGACGAGAAGAGCGACATATACAGTTATGGAGTGGTACTTCTAGAGCTGCTGACTGGTAAACCACCTTTAGATCCGTCCTTCGGGGAATGCATGAACATTGTTGAATGGGTAAACATACAAATCAGAAGTGAAAATGGCTTGGAAAAAACACTTGACCCAACCATAGTGGGTCAGTGTAAACATGTCCAAGAAGAAATGCTTCTTGTCCTCCGCATTGCACTTCTTTGCACAGCAAAGCTCCCAAAGGACAGGCCTTCAATGAGGGACGTTATCACAATGCTTGGAGAGGCCAAGCCAAGAAGGAAAAGCGTTAGTCACAATGGAGGATTAGGTAAATACACAAGAACTTTCTGA 3132 0.4189 MYLRFRCKGTGESRLTGKSKKPLRSETDKHGILGTAMQHDEVIIGCGGTVYIKLAQSQIAEKDELSVLLELKSGLVDPLNYLKDWQIPSNVTKTNEALPHCKWTGVVCNSEGFVEGLDLSNMNLSGKVSDSIRDLTALSSLNICSNAFASSLPESLSNLTMLKSIDVSDNYFIGNFPTGLGRAKGLTSVNASSNNFQGLLPEDLGNATSLESIDFRGSYFEGSIPKSFKNLKKLKFLGLSGNNFTGKIPGEIGQLASLETLIIGYNEFEGETPTEFGKLTNLKYLDLAVGNLSGQIPRELGMLKNLTTVYLYKNNFTGHIPYEFGNITSLVFLDLSDNQISGEIPQELGNLQNLQLLNLMCNRFTGPIPEKIGQLRKLEVLELWKNSLVGPLPKNLGKNSPLQWLDVSSNSLSGEIPPGLCNSGNLTKLILFDNAFSGSMPLGLSTCVSLVRVRIQNNLISGTIPVGFGNLPSLQRLELAKNNLTGQIPIDIASSMSLSFIDVSWNHLDSSLPSSILSTPNLQTFIASNNNFGGTIPQDFLDCLSLSVLDLSNNHISGKIPESIASCGKLVNVNLRNNRLTGEIPKAITTMPSLAVLDLSNNSLLGRIPETFGSSPALETLNLSYNKLEGPVPRNGVLTTINPYDLTGNAGLCGGILPPCSQGLTALKQQRNSHLKHVILGFVVGISVILSLGLMYFASRWLYGRWYVYSSFLHNWFRSSNEEWPWRLVAFQRVSFSSSDILASVMESNIIGMGGTGIVYKAEVHRPYGTVAVKKLWKTGTDIENNSDLLREVDLLGRLRHRNIVRLLGYLHNESDVMMVYEYMPNGNLGTALHGRQTGKLLVDWVSRYNIAVGVAQGLNYLHNDCYPSVIHRDIKSNNILLDENMDARIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSYGVVLLELLTGKPPLDPSFGECMNIVEWVNIQIRSENGLEKTLDPTIVGQCKHVQEEMLLVLRIALLCTAKLPKDRPSMRDVITMLGEAKPRRKSVSHNGGLGKYTRTF* 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02126 1043 SUPERFAMILY L domain-like 99 346 - -
Pte18g02126 1043 Gene3D Transferase(Phosphotransferase) domain 1 828 1034 - -
Pte18g02126 1043 SMART LRR_typ_2 375 399 IPR003591 -
Pte18g02126 1043 SMART LRR_typ_2 591 614 IPR003591 -
Pte18g02126 1043 SMART LRR_typ_2 327 351 IPR003591 -
Pte18g02126 1043 SMART LRR_typ_2 471 495 IPR003591 -
Pte18g02126 1043 SMART LRR_typ_2 543 567 IPR003591 -
Pte18g02126 1043 SMART LRR_typ_2 231 255 IPR003591 -
Pte18g02126 1043 SMART LRR_typ_2 135 159 IPR003591 -
Pte18g02126 1043 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 61 218 - -
Pte18g02126 1043 Pfam Leucine Rich repeat 328 343 IPR001611 GO:0005515
Pte18g02126 1043 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 402 664 - -
Pte18g02126 1043 Gene3D Ribonuclease Inhibitor 399 663 IPR032675 -
Pte18g02126 1043 Pfam Protein kinase domain 747 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g02126 1043 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 219 319 - -
Pte18g02126 1043 Pfam Leucine rich repeat 449 508 IPR001611 GO:0005515
Pte18g02126 1043 Pfam Leucine rich repeat 569 628 IPR001611 GO:0005515
Pte18g02126 1043 PRINTS Leucine-rich repeat signature 591 604 - -
Pte18g02126 1043 PRINTS Leucine-rich repeat signature 546 559 - -
Pte18g02126 1043 ProSitePatterns Serine/Threonine protein kinases active-site signature. 870 882 IPR008271 GO:0004672|GO:0006468
Pte18g02126 1043 ProSitePatterns Protein kinases ATP-binding region signature. 751 775 IPR017441 GO:0005524
Pte18g02126 1043 SUPERFAMILY Protein kinase-like (PK-like) 741 1020 IPR011009 -
Pte18g02126 1043 Gene3D Ribonuclease Inhibitor 63 184 IPR032675 -
Pte18g02126 1043 FunFam MDIS1-interacting receptor like kinase 1 745 827 - -
Pte18g02126 1043 ProSiteProfiles Leucine-rich repeat profile. 545 567 IPR001611 GO:0005515
Pte18g02126 1043 ProSiteProfiles Protein kinase domain profile. 745 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g02126 1043 Pfam Leucine Rich Repeat 546 567 IPR001611 GO:0005515
Pte18g02126 1043 Pfam Leucine rich repeat N-terminal domain 62 109 IPR013210 -
Pte18g02126 1043 Gene3D Phosphorylase Kinase; domain 1 744 827 - -
Pte18g02126 1043 SMART serkin_6 745 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g02126 1043 SUPERFAMILY RNI-like 285 634 - -
Pte18g02126 1043 Gene3D Ribonuclease Inhibitor 185 294 IPR032675 -
Pte18g02126 1043 Gene3D Ribonuclease Inhibitor 295 396 IPR032675 -
Pte18g02126 1043 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 372 497 IPR046959 -
Pte18g02126 1043 FunFam MDIS1-interacting receptor like kinase 1 828 1037 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02126 Pte-Chr18 31265458 31269968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02126 48 1035 Receptor kinase-like Gene Family AT1G08590 65.637 0.0 1287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte18g02126 Pkinase 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02126 - - qsu:112017136 1488.78