Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02093 ATGCAGCTCATTCATATACTGTACACTACATACGGTCTTTTTAATTGTCTTAATACTATTGTACCGCATTGTTGTTGTTCTGGTTCATTTTTCAGTACGTTGCAGTGTTCTGTTCTGTTTATGGCAAGCGGCGGTGAAGAACAATATGCCACCCCTCGATGTGAGGATGGGAAGGATTTTGGAGACAAATCAGAAATGACTGAAGCACAGGATGAGGACAAAGGAAACCAGAGAAAAAAGGGTTCTCATTTTTCTTCCTCTGCATCCGCTCATGACTTGAGAAACCATGATTTGGAAAAAGAGAAGGACGATATTTCATCTCCAAGAGGAGTTTTGGAAGCATGCACGAAAGAATCGGATTCTGACGATGTCTCTCAAGAAAAGAATTCTAAAGCACAAAATGCCTGTAAAAAGCCTGGGGCATTGTTTCGTTGGGGCAAATTATTGAAATTATGGAAGAAAAAGTCGTTTCAGCGCCTGGGGTCCTTTCCTCAATGTGTGCCAAAGCTACCAAAATGGAAAAGCCCCAGCACGACGGAAAGTTCCTTCATGAGTGATCTATACAACTCCAAGTCTTCTATGGTGACCTTCAGCTTATCGGATCTCCGAACTGCAACGGACAACTTTAACAATGAAAATTTGATTGGGAAGGGTGGTTTTTCTGAAGTTTACCAAGGTTGTTTGCCAGACGGGCAACTGTTAGCCGTGAAGCGACTAATTAAAGGAACATCAGATGAGAGAACAGCTGAGTTCCTATCAGAGATTGGCGTCATCGCTTATTTGGACCATCCCAACACAGCCAAGCTACTTGGTTATGGTGTTGAAGGAGGATTGCACCTAGTTTTTAAACTATCTCCACTGGGAAGTCTAGGGCGTGTTCTTCACGGTTCAAACAGAAACAAATTAGATTGGGGTAAAAGATATAAGATTACCTTGGGGACAGCTGAGGGTCTGCTCTATCTCCATGAGAATTGTCACAAGAGAATCATTCACAGAGATATCAAGGCAAATAATGTCCTACTGACTGAGAAATTCGAGCCAGAGATTTGTGATTTTGGATTAGCAAAATGGCTCCCTGAAAAATGGACTCATCATAATGTATCAAAATTTGAGGGCACATTCGGGTACTTTGCTCCAGAATATATCATGCACGGAGTGGTGGATGAGAAAATAGATGTTTATTCTTTTGGAATTCTTCTTTTGGAGATTGTGAGTGGGCGCCCAGCTTTGGACGACTCGCAGCTCAGTATTATGCAATGGGCCAAGCCCCTGCTTGATAATAACAAGATTGATGAGCTTGTCGATCCCTCCCTTGGTGGTAATTATGATTCCAAAGAGTTGGACAGAGTGGTTTTGACTGCATCCTTGTGTGTTGAGCAGTCTTCCATCTTGCGCCCCATGATGAATGAAGTAGTGGTGCTTTTGAGAGGTGATGAAAATATCCTAGAATCTAGGCGGTTCCAGAGAAGAACATACTCACATGAGCTACTGGATGCACAGGAATATAACTCTACAAGATGCTCGAGTGATATCAATCGATTGAAGGAGATTGCTTTAAGTTAG 1563 0.4235 MQLIHILYTTYGLFNCLNTIVPHCCCSGSFFSTLQCSVLFMASGGEEQYATPRCEDGKDFGDKSEMTEAQDEDKGNQRKKGSHFSSSASAHDLRNHDLEKEKDDISSPRGVLEACTKESDSDDVSQEKNSKAQNACKKPGALFRWGKLLKLWKKKSFQRLGSFPQCVPKLPKWKSPSTTESSFMSDLYNSKSSMVTFSLSDLRTATDNFNNENLIGKGGFSEVYQGCLPDGQLLAVKRLIKGTSDERTAEFLSEIGVIAYLDHPNTAKLLGYGVEGGLHLVFKLSPLGSLGRVLHGSNRNKLDWGKRYKITLGTAEGLLYLHENCHKRIIHRDIKANNVLLTEKFEPEICDFGLAKWLPEKWTHHNVSKFEGTFGYFAPEYIMHGVVDEKIDVYSFGILLLEIVSGRPALDDSQLSIMQWAKPLLDNNKIDELVDPSLGGNYDSKELDRVVLTASLCVEQSSILRPMMNEVVVLLRGDENILESRRFQRRTYSHELLDAQEYNSTRCSSDINRLKEIALS* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02093 520 Gene3D Phosphorylase Kinase; domain 1 173 283 - -
Pte18g02093 520 SMART serkin_6 209 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g02093 520 SUPERFAMILY Protein kinase-like (PK-like) 192 478 IPR011009 -
Pte18g02093 520 ProSiteProfiles Protein kinase domain profile. 209 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g02093 520 Pfam Protein kinase domain 210 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g02093 520 PANTHER OS08G0249100 PROTEIN 74 502 IPR046958 -
Pte18g02093 520 MobiDBLite consensus disorder prediction 90 108 - -
Pte18g02093 520 ProSitePatterns Protein kinases ATP-binding region signature. 215 237 IPR017441 GO:0005524
Pte18g02093 520 Gene3D Transferase(Phosphotransferase) domain 1 286 498 - -
Pte18g02093 520 MobiDBLite consensus disorder prediction 51 80 - -
Pte18g02093 520 MobiDBLite consensus disorder prediction 51 110 - -
Pte18g02093 520 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 286 489 - -
Pte18g02093 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02093 Pte-Chr18 31040134 31045036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02093 171 514 Trihelix Transcription Factor Family AT5G38560 38.601 2.08e-71 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pte18g02093 Pkinase 1.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02093 - - qsa:O6P43_007563 590.497