Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02088 ATGGCGGTTGACTTGAGTTCCATAATGTCGAAATTTCAAAATGTATCCACTTCTGATCATGCTTTTGTGGTTGCCATAAACATATTCGTAGCACTCCTCTGTGCTTGCATCGTAATTGGCCATCTCCTTGAGGAGAATTGGTGGATGAATGAATCGATCGCTGCTCTTCTAATTGGTCTTGCTACTGGTGTGGTGATTTTGCTGGTCAGTGGGGGTAAAAACTCCCATCTTCTAACTTTCAGCGAAGATCTATTCTTTATATACCTTCTTCCACCCATTATATTCAATGCCGGGTTTCAAGTGAAAAAGAAGCAGTTTTTTGTCAACTTCATCACCATCGTGCTATTTGGTGCTGTTGGTGCCTTAATATCCTGTGCCATTATAAGTTTCGGTGTCGTGAATGATGCTACATCTGTAGTGCTTTTCAATGCAATTAAGGGTGTTGACCTCACTAAAGTCGATCACAGGATTGCTTTTCATTTTATTGGCAAATTCATCTACCTGTTCATTTCAAGCACATTGCTCGGCGTTGCGGCTGGCCTCGTTAGTGCTTACATAATCAAAAAGCTCTACATTGGCAGGCACTCTACAGATCGCGAAGTTGCTCTTATGATGCTGATGGCTTACCTTTCATATATGCTGGCTGAATTATGCCACTTGAGTGGTATTCTCACTGTATTCTTTTGTGGGATTGTCATGTCTCACTATACATGGCATAATGTTACCAAGAGTTCAAGAATCACAACGAAGCATACTTTTGCAACCTTGTCATTTGTTGCAGAGACTTTCATCTTCCTTTATGTTGGCATGGATGCGTTAGACATAGAAAAATGGCAATTTGTTAGCGATAGCCCTGGAACGTCTGTTGCGGTTAGTGGCATACTGCTGGTTCTAGTTCTAGCTGGAAGAGCAGCCTTTGTGTTTCCCTTGTCGTTTTTATCCAACTTGATTAAAAGCTCTCCACGAGAAAAAATTACGTTAAGACAACAGGTGATAATCTGGTGGGCTGGTCTCATGAGAGGTGCTGTATCGATTGCACTTGCATATAATCAGTTCACTATGTCTGGGTATACTCAAATGAGGTCACATGCTATCATGATCACAAGTACAATAACTGTTGTTCTTTTCAGCACGATGGTTTTTGGTTTGATGACAAAACCTCTCATTAGAATCTTGCTTCCTCATTCAAAACAAACGCCCAGCTTGCTAGTGTCAGATCCATCCAGTCCAAAACCGATGACCGTGCCACTTCTTGAAAGTTCGCAGGCGTCGGAAACTGATCTTGTTGGGTATGAACCTCCCCATCCAAGCAGCCTACGCGAACTTCTGGCTACCCCAGCTCATACAGTCCATCGGTACTGGCGTAATTTTGATGATGCTTTCATGCGACCAGTATTTGGTGGGAGGGGTTTCGTTCCTGTAGCTCCTGGTTCGCCAACTGAACACAGTCAAAATCAGTGGCGTTAG 1467 0.4294 MAVDLSSIMSKFQNVSTSDHAFVVAINIFVALLCACIVIGHLLEENWWMNESIAALLIGLATGVVILLVSGGKNSHLLTFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIVLFGAVGALISCAIISFGVVNDATSVVLFNAIKGVDLTKVDHRIAFHFIGKFIYLFISSTLLGVAAGLVSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELCHLSGILTVFFCGIVMSHYTWHNVTKSSRITTKHTFATLSFVAETFIFLYVGMDALDIEKWQFVSDSPGTSVAVSGILLVLVLAGRAAFVFPLSFLSNLIKSSPREKITLRQQVIIWWAGLMRGAVSIALAYNQFTMSGYTQMRSHAIMITSTITVVLFSTMVFGLMTKPLIRILLPHSKQTPSLLVSDPSSPKPMTVPLLESSQASETDLVGYEPPHPSSLRELLATPAHTVHRYWRNFDDAFMRPVFGGRGFVPVAPGSPTEHSQNQWR* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02088 488 Pfam Sodium/hydrogen exchanger family 127 389 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pte18g02088 488 PANTHER SODIUM/HYDROGEN EXCHANGER 131 466 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Pte18g02088 488 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte18g02088 488 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte18g02088 488 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte18g02088 488 Gene3D - 116 398 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02088 Pte-Chr18 31016737 31020586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02088 6 486 Antiporters AT3G05030 67.472 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02088 - - qsa:O6P43_007580 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g02088 18 31016737 31020586 Pte18g02088 18 31016737 31020586 RCT