Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02082 ATGCTGATATCCTCACTGGAGGAGCAGACGTCTTTGCCAAGTGAGAATATTAATGAGCTTACAAGTCCATCCGCATTGAATCTGAATTCCGATTTACCCGATGGGCAGCGATCCTTTGCGGAGTATCTTGACTCTGCACCTTATACAGACGTAAAGGTTGTTCCAGAGCATGAAAAACATGAACTTGAGCAGTTAATATTAAACTTAGAAGGAGAAATCGGGCAGCTTAATCGTATTCAGAAAAAATTGGATGAGAATCGGAAAGAAGCATTAAACAAGATATTAGACATTAAAGGCAGCATTCGTGTTTTTTGTCGTGTTCGGCCATTTCTGTTATCTGACAAGAGAAGACGAATCTACGAAACTGTTTCAATTGAAGCAGAGAAAGTTATAGTTAGGTTGGGAGGAACAAGGAAAGAGTTTGAATTCGATAAAGTTTTCCCTCAGGAAGCACACCAAGATTTTGTCTTTGATGAGGTAGAACCAATAATCAGATCTGCACTTGATGGACACAATGTCTGTGTCCTTGCTTATGGACAAACAGGCACTGGCAAGACATTTACAATGGAAGGCACAAACGAGCAACCTGGAATTATTCCACGTGCTCTCAAGGCGTTATTTCGTCTAGCCTCTTTGGATCATTCATCATCCATCTCATTTTCGATGAGCATGCTTGAAGTGTACATGGGTAATCTTAGAGATCTCCTGGCTCCTAAATCTCATCATCGAGGAAGGCAACCAGTGACAAAATGTATCCTCAATATTCAAACAGATCCTAAGGGATCAGTTGAAATTGAGGGCCTGTCTGAAGTACAGATTCTGGATTATGCAAAAGCTAGATGGTGGTATAACAAGGGAAGGCGGGTGAGATCTACATCTTGGACTAATGTGAATGAAGTTTCTAGCAGGTCACACTGCTTGACAAGGATTGCGATCTTTCGGAAGAGAGGCGCTTCAGAATCTAAGGTCGAAATTAGCAAACTGTGGATGATTGATCTTGGGGGTAGTGAGCGTTTACTTAAAACTGGAGCTACCGGACTCACCCTTGACGAAGGAAGAGCCATTAATCTTTCACTTTCAGCTTTAGGTGATGTAATTGCCGCTCTGAGGAGGAAGAGGCGTCATGTTCCTTACAGAAACAGCAAGCTCACGCAAATCCTGAAAGATTCACTAGGTGATGGTTCAAAAGTTGTGATGCTGGTGCATATAAGTCCCTCTGAAGAAGATATTGGCGAAACTATTTGTTCCCTTAGCTTTGTAAGAGAGCGAGATCAGTAG 1278 0.421 MLISSLEEQTSLPSENINELTSPSALNLNSDLPDGQRSFAEYLDSAPYTDVKVVPEHEKHELEQLILNLEGEIGQLNRIQKKLDENRKEALNKILDIKGSIRVFCRVRPFLLSDKRRRIYETVSIEAEKVIVRLGGTRKEFEFDKVFPQEAHQDFVFDEVEPIIRSALDGHNVCVLAYGQTGTGKTFTMEGTNEQPGIIPRALKALFRLASLDHSSSISFSMSMLEVYMGNLRDLLAPKSHHRGRQPVTKCILNIQTDPKGSVEIEGLSEVQILDYAKARWWYNKGRRVRSTSWTNVNEVSSRSHCLTRIAIFRKRGASESKVEISKLWMIDLGGSERLLKTGATGLTLDEGRAINLSLSALGDVIAALRRKRRHVPYRNSKLTQILKDSLGDGSKVVMLVHISPSEEDIGETICSLSFVRERDQ* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02082 425 PRINTS Kinesin heavy chain signature 295 312 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g02082 425 PRINTS Kinesin heavy chain signature 376 397 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g02082 425 PRINTS Kinesin heavy chain signature 327 345 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g02082 425 PRINTS Kinesin heavy chain signature 170 191 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g02082 425 Pfam Kinesin motor domain 106 421 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g02082 425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 419 IPR027417 -
Pte18g02082 425 Gene3D Kinesin motor domain 48 424 IPR036961 -
Pte18g02082 425 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 52 424 - -
Pte18g02082 425 ProSiteProfiles Kinesin motor domain profile. 100 425 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g02082 425 Coils Coil 59 93 - -
Pte18g02082 425 PANTHER KINESIN-LIKE PROTEIN KLP-3 59 419 IPR027640 GO:0003777|GO:0007018
Pte18g02082 425 SMART kinesin_4 98 425 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02082 Pte-Chr18 30987769 30990077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02082 59 420 Calmodulin-binding Proteins AT5G65930 39.782 5.72e-74 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02082 - - qsa:O6P43_011170 623.239