Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02076 ATGTGGATTGATAAATCTTATGAAATGCTTTCACCACTGGTTTCTTGGATTCTCTCCGCTTCTTCTTCTTCCTCTTCCACTTATTCATCTGAGGGTGAAGGATTAGAAAGCAGCACTGCCAACAACGCCCAAGTTAACTCTCTGAACGACAATGACGATGACATCGATCGGAACGATGACAATGATAAAAAGGACGATCCCTCTACATCTTCCGCCCAAAATACCATTCCTTCCGCTGTTCCATTACGCGATGTTTCACTGCCCGTTACCGTAGCTTTCCCCACCCCTGAAGACCATCCTGACAATACAGAACCTGTTATCAACACAGCAACCATTGGTGTTTCTTGTACGCAGGGAAGAAGTGTACCATGGTCAAATGACTCTCGGAGACAGCCTCAGAGGCTGTGGACGAAAGAAGATGAGGTGAACCTGCTCGAGGGTTACCTTGATTACGTTAATGCAAACGTGCAGCGGGGTTCGGGAAAGCCAAACTGCTCTCTGCAAAATGATGTAGCTTCATTCTATGATGACGTGAAGCCTAAATTGAAGGTTGATTTTAACAAGAACCAGTTGGTGGAAAAGTTGCGGAGGTTGAAAAGGAAACACAGCCTCGTGTTGGACAGAATCAAGTCTGGTGAAAAACGACGTCCCTTCAGGTGTCTCAATGAGGAGGCAATTTTTGAAATTTCCAACAAGTTGTGGGGTAACTGGATGAATTCATTGAATGCTTCCGGTAACCAAATTAATGTTAAGGTGCAGCTCGAAAAAGATGGAGAAGGAGAAGAAGGCGATGAACACATTGACGATGAGATGACAAGGCCAACGAAGCGGCCAAGGTTGATTAGTAATGAGTTCGAGGGTTTGAATAATGATGAGTTGGTGCCAAACGGAAATAAAGATATGAATAGAATAAAGGGTCTGGTTGAGGAGACCATGAGGAATTGTTTATCTCCACTGTTCAAGGAGTTGATGACTGAGACATTGAAAGAGCTGGGGACCGTATCGAATCCAACAATGCCATTAAGTTTGGGGGAGCAGTCCGAGCAGAGGAAGAATTGCAGTGGATGTGGAGGAACAGAGGACAAAGACAAGTGGAGAGGAGAGAGGATTATAGAGTTGGATATGTATTCGAAGAAATTGGAGGTGGTGCAGGATCATGTCAAAGCTGCATTGTTGGAGCTACGGTCTATCGGAAGTAAATAA 1203 0.4464 MWIDKSYEMLSPLVSWILSASSSSSSTYSSEGEGLESSTANNAQVNSLNDNDDDIDRNDDNDKKDDPSTSSAQNTIPSAVPLRDVSLPVTVAFPTPEDHPDNTEPVINTATIGVSCTQGRSVPWSNDSRRQPQRLWTKEDEVNLLEGYLDYVNANVQRGSGKPNCSLQNDVASFYDDVKPKLKVDFNKNQLVEKLRRLKRKHSLVLDRIKSGEKRRPFRCLNEEAIFEISNKLWGNWMNSLNASGNQINVKVQLEKDGEGEEGDEHIDDEMTRPTKRPRLISNEFEGLNNDELVPNGNKDMNRIKGLVEETMRNCLSPLFKELMTETLKELGTVSNPTMPLSLGEQSEQRKNCSGCGGTEDKDKWRGERIIELDMYSKKLEVVQDHVKAALLELRSIGSK* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02076 400 MobiDBLite consensus disorder prediction 23 49 - -
Pte18g02076 400 MobiDBLite consensus disorder prediction 23 81 - -
Pte18g02076 400 MobiDBLite consensus disorder prediction 256 275 - -
Pte18g02076 400 MobiDBLite consensus disorder prediction 334 354 - -
Pte18g02076 400 MobiDBLite consensus disorder prediction 334 359 - -
Pte18g02076 400 PANTHER BNAANNG10740D PROTEIN-RELATED 22 393 IPR007592 GO:0006355
Pte18g02076 400 Pfam Protein of unknown function, DUF573 133 235 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02076 Pte-Chr18 30941040 30942242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02076 123 397 GeBP Transcription Factor Family AT5G28040 33.739 1.45e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pte18g02076 DUF573 8.2e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02076 - - qsa:O6P43_011184 211.075