Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02069 ATGTTCGATGAAACTTCAAACCAGTTCCAACAATTGGCTTCATCGACAACTTTACTCCCTCTTCACTTACCCTTCCCACTCCATTTCTCCGCTACACATAACATGAACTCCTTCCCTCTTTTCAATCCTATTTCTAACCCTTCTCGCCATTTGTCCCCTCAGATCCCACACAGTCCTTTGCACCCATTGCACCACCATTCTTCCACCCACGATGATGAGCAACACAAACCAGATACTACCACGGCATCCATGACCCTTGCCGTGGACAGCCAAAGACCCAGGCCTGATTTTACTCAGCTTATTGATGATGATAGTGTTTGGAGTAACGAGGAAGTACTAGCGCTGTTAAGGGTCAGATCTAGCATGGAGAGTTGGTTCTCTGACTTCACTTGGGAACATGTCTCGAGGAAGCTCTTAGAGATTGGTTTTAAGAGGAGTGCTGAGAAGTGCAAGGACAAGTTTGAATTGGAAAGCAGATACTTCAATGCCAACATTAATTGCAACAAGAACTACTCCAAGTTTGCGAGTGATCTTCAAGAGCTGTATCAGGCTGATCAGCAAAACCTGGAATGTGCGACAGCAAAAACCCCGCTGCTGCCAGAAAAGTCATCTGAGGGACAAGACAAAATGGTTCAGAATTTGGAAGCACATTCAGGAAAAAACGTAGTCGGGAAACAATATGAGGGCATTGCTGCTGATCACCAAGCAGTGGAAAAGTTGAAGAGGAAGAGATCGTCATCTGCTGATCATAAGTTTGAGATGTTTCAGGTTTTTTGTGAGAAAATTGTCAACTGTGTTATGTCTCGGCAAGAAGAGATGCATAAAAAGCTCATTGAAGACATGGTTAAAAGAGATAAAGAGAAGATTGCTAGAGAAGAAGTTTGGAAGAAGCAAGAAATGGAGAAGATGAACAAGGACTTGGAGATTATGGCAAAAGAGCAGGGTGTAGCTGGCGATAGGCAAGCCACGATAATTGAGTTCCTGAAAAAGTTTGCAGCGACTTCTTCTGATACTTCAAACGACAATGATCATGCTCAGGTACTTAACACCGCAAACCCCAATACAGCTCCGACCAGTTCTTTAATGCACTTGGATAACCATATTTCTCACACTGTTCAGCAAAACAATCATGGAGCACAAAAATCTTCTTCCACCTGCAGTCCATGTCGGCAAAGTGTTTCTACATCCTCTGATGAAAACTTTCAAACAATCAAACACTTTTCTTCAACGGAAAAACTGGCTTATTCGTCAGCTATAAACCCATATCTCCAGACCACTGGGCGAGACATCACATTAACAACTCGGTATATTCCCATAAGAGATCATTCAAAGCCCACATTGACTGATGAGAAGGATGAGTACTTTGGAAGAAGATGGCCAAAGGATGAAGTTCTCGCATTAGTAAACCTCAGGTGCAGTCTCTACAACCAGGCTGGTGAAGATAAAGAGGGAGATAGAGCTCCCTTGTGGGAGAGAATCTCACAACGGATGTTGGAATTGGGTTACCAGAGGAGTTCAAAGCGATGCAAAGAGAAATGGGAGAACATAAACAAGTACTTCAGGAAGACCAAGAATGTTCACAACAAAAGGTCTCTTGACTCTAGGACTTGTCCATACTTCCATCCACTGAGTGCTATGTACAATCAAGGAAAGGTCATGATCTCTCAAAGTGAAATGGCCGTCGACAACCACTTGACGAATTCGCCTTCAGACCACCTGTTAGATCAACTGCATAGCCATCATGTCATCTGCAATATTACCAGTAATGTCGACGAAGTTGATAATAAAAACTCGATTCACGCACACCCTTTTGATTATGAGTTGTAA 1827 0.4308 MFDETSNQFQQLASSTTLLPLHLPFPLHFSATHNMNSFPLFNPISNPSRHLSPQIPHSPLHPLHHHSSTHDDEQHKPDTTTASMTLAVDSQRPRPDFTQLIDDDSVWSNEEVLALLRVRSSMESWFSDFTWEHVSRKLLEIGFKRSAEKCKDKFELESRYFNANINCNKNYSKFASDLQELYQADQQNLECATAKTPLLPEKSSEGQDKMVQNLEAHSGKNVVGKQYEGIAADHQAVEKLKRKRSSSADHKFEMFQVFCEKIVNCVMSRQEEMHKKLIEDMVKRDKEKIAREEVWKKQEMEKMNKDLEIMAKEQGVAGDRQATIIEFLKKFAATSSDTSNDNDHAQVLNTANPNTAPTSSLMHLDNHISHTVQQNNHGAQKSSSTCSPCRQSVSTSSDENFQTIKHFSSTEKLAYSSAINPYLQTTGRDITLTTRYIPIRDHSKPTLTDEKDEYFGRRWPKDEVLALVNLRCSLYNQAGEDKEGDRAPLWERISQRMLELGYQRSSKRCKEKWENINKYFRKTKNVHNKRSLDSRTCPYFHPLSAMYNQGKVMISQSEMAVDNHLTNSPSDHLLDQLHSHHVICNITSNVDEVDNKNSIHAHPFDYEL* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02069 608 MobiDBLite consensus disorder prediction 335 354 - -
Pte18g02069 608 Coils Coil 175 195 - -
Pte18g02069 608 FunFam Trihelix transcription factor GT-2 107 163 - -
Pte18g02069 608 PANTHER FI21293P1 64 592 - -
Pte18g02069 608 ProSiteProfiles Myb-like domain profile. 107 155 IPR001005 -
Pte18g02069 608 SMART sant 455 519 IPR001005 -
Pte18g02069 608 SMART sant 103 160 IPR001005 -
Pte18g02069 608 Pfam Myb/SANT-like DNA-binding domain 106 174 IPR044822 -
Pte18g02069 608 Pfam Myb/SANT-like DNA-binding domain 457 545 IPR044822 -
Pte18g02069 608 CDD GT1 457 524 - -
Pte18g02069 608 ProSiteProfiles Myb-like domain profile. 451 517 IPR001005 -
Pte18g02069 608 MobiDBLite consensus disorder prediction 49 78 - -
Pte18g02069 608 Gene3D - 459 522 - -
Pte18g02069 608 Gene3D - 107 162 - -
Pte18g02069 608 MobiDBLite consensus disorder prediction 64 78 - -
Pte18g02069 608 MobiDBLite consensus disorder prediction 374 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02069 Pte-Chr18 30876424 30879372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02069 458 549 Trihelix Transcription Factor Family AT1G76890 59.783 7.63e-30 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte18g02069 Myb_DNA-bind_4 6.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02069 - - vvi:100255432 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g02069 18 30876424 30879372 Pte18g02069 18 30876424 30879372 RCT