Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02068 ATGGAGCAGTACGAGATATTGGAACAAATTGGAAAGGGAGCCTTTGGTTCTGCTCTGCTTGTCAAGCATAAGCACGAAAAGAAGAAGTATGTGTTGAAAAAGATTCGTCTTGCCCGCCAGACGGAGAGGTCTCGTAGATCTGCTCACCTGGAGATGGAGCTCATTTCTAAATTACGAAACCCATTTGTTGTGGAGTACAAAGATTCCTGGGTAGAAAAGGGTTGCTATGTGTGCATTGTTATAGGTTATTGTGAAGGAGGAGATATGGCTGAGGTTATCAAAAAGGCTAATGGTGTTCTTTTTTCAGAAGAGAAACTCTGTAAATGGCTTGTTCAGCTTCTTATGGCGCTTGAGTACTTGCACATGAATCATATTCTTCACCGTGATGTCAAGTGTTCTAATATATTCTTGACGAAAGATCAAGACATCCGACTTGGTGACTTTGGACTTGCCAAAATGCTGACTTCAGACGATCTTGCTTCCTCTGTTGTCGGAACTCCCAGCTATATGTGTCCTGAGCTTCTTGCTGATATACCATATGGTTCAAAATCAGACATTTGGTCCTTGGGATGCTGCATATATGAAATGACAGCCCTTAAACCTGCATTTAAGGCATTTGATATACAAGCCCTGATTAACAAAATTAACAAGTCCATAGTTTCCCCACTCCCTACAAAGTATTCAGGTGCATTTCGAAGTCTTGTCAAAAGCATGCTGCGGAAAAACCCAGAACTGAGACCTAGTGCTGCACAGCTTCTTGGGCATCCACACCTTCAACCTTATGTCATTAGGATCCATCTCAAAATAAATACCCCCAGATGCAGTACCCTACCAGTTCACTGGTCAGATTCCAACTATATGAGGAAAACTAGATTTTTAGATCCCGACGATGACACTGTTTCCGCTGATATGGATAAACAGCATATTTTCAGCAGTGATGGGACTTCAAATCCTATTCTATCTGGCGGTGAGCGAGATTCCATATCCTCCATTCAGGAGATACATTCCACTTCAAGAAGCATAGAATTGTCAATTGCAACTACCCGTAAAGAGACATGCAACCAGAAAAAGGTTGCCTCAAGTATTTCAAGTGTTACCAAAGCTCCATCTAAAGCTTCTGCTGTCGCTAAGAAATCAGCTGAACACTTGAAGAACCAACCTGTGTCCTTGTCTCGCAACGGGAGAAAACCAGTTACTACAACAAGAAGGTCATCTTTGCCACTGCCATCAAGGAGTGTCGTCCAACAATCCCGTTCCAGAAGCAACACTGGTATACTTACCCAAATAAGCTCTCCAGATGTCTCAGTAAATTCACCCCGAATTGACAGAATTGCCGAATTCCCTTTGGCATCGTACGAAGAACCTTTATTTTCCCGTCGCAGAACGTCGTCGGTTTCTGGTCAAGGTTCTTCATGCACCCCAACTTGCAGCGATCGTTCAATAACAAAAGATAAATGCACAGTTCAGATATGTACAAAAACCTCTGAGAAAACCTCTTACGTGGATCCATGGCAGGAAATCAAGCACTGCATGTTTCAGAATGTTGAGGAAAGGAATGACTCCTCTGATCAAAATGCAACTGCTAGAGCATCGAGCCGCATGTCATCGGACTTGCACAGACGACGTTTTGACCCCTCTTCTTTCATACAAAGAGCCGAAGCTTTGGAAGGAGTGCTAGAATTTAGTGCAAGATTGCTGCAACATGAAAGGTACGAAGAACTTGGGGTATTGCTGAAACCTTTTGGGCCTGGAAAGGTCTCCCCTAGAGAAACTGCCATCTGGTTGACTAAGAGTTTCAAAGAGAACACCGGCAAGCAGGAAGATTGA 1827 0.4335 MEQYEILEQIGKGAFGSALLVKHKHEKKKYVLKKIRLARQTERSRRSAHLEMELISKLRNPFVVEYKDSWVEKGCYVCIVIGYCEGGDMAEVIKKANGVLFSEEKLCKWLVQLLMALEYLHMNHILHRDVKCSNIFLTKDQDIRLGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTALKPAFKAFDIQALINKINKSIVSPLPTKYSGAFRSLVKSMLRKNPELRPSAAQLLGHPHLQPYVIRIHLKINTPRCSTLPVHWSDSNYMRKTRFLDPDDDTVSADMDKQHIFSSDGTSNPILSGGERDSISSIQEIHSTSRSIELSIATTRKETCNQKKVASSISSVTKAPSKASAVAKKSAEHLKNQPVSLSRNGRKPVTTTRRSSLPLPSRSVVQQSRSRSNTGILTQISSPDVSVNSPRIDRIAEFPLASYEEPLFSRRRTSSVSGQGSSCTPTCSDRSITKDKCTVQICTKTSEKTSYVDPWQEIKHCMFQNVEERNDSSDQNATARASSRMSSDLHRRRFDPSSFIQRAEALEGVLEFSARLLQHERYEELGVLLKPFGPGKVSPRETAIWLTKSFKENTGKQED* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02068 608 MobiDBLite consensus disorder prediction 364 425 - -
Pte18g02068 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Pte18g02068 608 FunFam Serine/threonine-protein kinase Nek2 84 274 - -
Pte18g02068 608 MobiDBLite consensus disorder prediction 517 533 - -
Pte18g02068 608 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Pte18g02068 608 MobiDBLite consensus disorder prediction 517 538 - -
Pte18g02068 608 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g02068 608 MobiDBLite consensus disorder prediction 384 425 - -
Pte18g02068 608 Gene3D Transferase(Phosphotransferase) domain 1 84 270 - -
Pte18g02068 608 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g02068 608 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 560 - -
Pte18g02068 608 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pte18g02068 608 CDD STKc_Nek 3 258 - -
Pte18g02068 608 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g02068 608 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Pte18g02068 608 SUPERFAMILY Protein kinase-like (PK-like) 1 320 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02068 Pte-Chr18 30868140 30872929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02068 10 259 MAP Kinase Kinase Kinase AT1G53570 31.765 1.81e-37 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Pte18g02068 Pkinase 7.7e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02068 K08857 - qsa:O6P43_011197 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g02068 18 30868140 30872929 Pte18g02068 18 30868140 30872929 RCT