Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02040 ATGATGATGACCATGGAGGGAATGATGGATAAAGGGGTACTTGATGATATTATACGAAGACTGCTAGAAGGGAAAGGTGGAAAACAGGTTCAGCTTTATGAAACAGAGATCCGTCAACTCTGCGTCAACGCCCGCCAAACCCTCCTATCTCAACCAAATCTCCTCGAAATCCATGCTCCAGTCCGCATATGTGGTGACATACATGGGCAGTACCAGGACTTGCTGAGGTTGTTTGAATATGGAGGCTATCCTCCTGCTGCAAACTACTTGTTCCTAGGTGATTACGTAGACAGAGGGAAACAAAGTCTGGAGACAATTTGTTTGCTTTTGGCCTACAAAATCAGATATCCTGACAAAATTTATCTCTTGAGAGGAAACCATGAGGATGCAAAGATAAACAGGATTTATGGTTTCTATGATGAATGTAAGAGGAGGTTTAATGTTAGGCTATGGAAGATATTCACAGATTGTTTCAATTGCTTGCCTGCAGCAGCACTAATTGATGACAAGATTCTTTGTATGCATGGTGGACTCTCGCCTGAGTTGGAAAATTTGGATCAGATAAGGGAAATTTCAAGACCTACAGAGATTCCAGACAATGGTCTGCTGTGCGATCTGCTTTGGTCTGATCCTGATAATAGCGTTGAAGGGTGGGCAGAGAGTGACAGAGGCGTTTCAAGTACTTTTGGACCTGACATAGTCGCAGACTTCTTGGATAAAAACGACCTTGATCTCATTTGCCGAGGCCATCAGGTGGTGGAGGACGGGTATGAATTCTTTGCTAAACGAAGACTGGTCACAATATTTTCTGCTCCAAACTATGGTGGGGAGTTTGATAATGCCGGTGCTTTGTTGAGTGTTGACGAGTCTCTTGTGTGTTCCTTCGAAATATTGAAGCCAATTGACGTGAAAGGGTCAGCAAGTGGTTCTTCAAGGGTGACCCTTAAGAAGCCTCCCAAATCTGGAAAGATCTGA 975 0.4379 MMMTMEGMMDKGVLDDIIRRLLEGKGGKQVQLYETEIRQLCVNARQTLLSQPNLLEIHAPVRICGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIYLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPAAALIDDKILCMHGGLSPELENLDQIREISRPTEIPDNGLLCDLLWSDPDNSVEGWAESDRGVSSTFGPDIVADFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEILKPIDVKGSASGSSRVTLKKPPKSGKI* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02040 324 CDD MPP_PP1_PPKL 13 300 - -
Pte18g02040 324 Gene3D - 7 308 IPR029052 -
Pte18g02040 324 MobiDBLite consensus disorder prediction 305 324 - -
Pte18g02040 324 ProSitePatterns Serine/threonine specific protein phosphatases signature. 123 128 IPR006186 GO:0016787
Pte18g02040 324 SUPERFAMILY Metallo-dependent phosphatases 16 303 IPR029052 -
Pte18g02040 324 FunFam Serine/threonine-protein phosphatase 4 309 - -
Pte18g02040 324 Pfam Calcineurin-like phosphoesterase 61 252 IPR004843 GO:0016787
Pte18g02040 324 SMART pp2a_7 32 302 IPR006186 GO:0016787
Pte18g02040 324 Pfam Serine-threonine protein phosphatase N-terminal domain 14 57 IPR031675 -
Pte18g02040 324 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 17 307 - -
Pte18g02040 324 PRINTS Serine/threonine phosphatase family signature 185 212 IPR006186 GO:0016787
Pte18g02040 324 PRINTS Serine/threonine phosphatase family signature 89 116 IPR006186 GO:0016787
Pte18g02040 324 PRINTS Serine/threonine phosphatase family signature 242 262 IPR006186 GO:0016787
Pte18g02040 324 PRINTS Serine/threonine phosphatase family signature 156 182 IPR006186 GO:0016787
Pte18g02040 324 PRINTS Serine/threonine phosphatase family signature 60 87 IPR006186 GO:0016787
Pte18g02040 324 PRINTS Serine/threonine phosphatase family signature 264 280 IPR006186 GO:0016787
Pte18g02040 324 PRINTS Serine/threonine phosphatase family signature 122 146 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02040 Pte-Chr18 30699489 30702292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02040 39 245 Calmodulin-binding Proteins AT5G63870 32.389 5.34e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02040 K06269 - qsu:112032731 603.208