Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02038 ATGGGGATCGATTTAAAGGCAGGAGGTAAGTCCAAGAAGACAAAGAGGACAGCACCAAAGTCCAATGATATCTATCTCAAGCTGTTGGTCAAGCTTTACCGCTTCCTTGTGCGGAGAACTGAGAGCAAGTTCAATGCTGTCATTTTGAAGCGATTATTTATGTCAAAAGTCAACAAGCCTCCAATGTCCCTTTCAAGGTTGATCTCCTTCATGAAGGGGAAGGAGGACAAAATTGCTGTCATTGTGGGTAATGTCACTGATGATGTTCGAGTATATGATGTCCCCCCTCTAAAGGTTACTGCGCTAAGGTTTACAGAAACTGCAAGGGCGAGGATTGAAAAAGCTGGTGGCGAGTGCTTGACCTTTGATCAGCTTGCTCTTAGGGCTCCCCTTGGGCAAAACACGGTTCTCCTCAGGGGACCTAAGAACGGTCGTGAAGCTGTTAAACACTTCGGCCCTGCTCCTGGTGTCCCGCATAGTCACTCTAAGCCTTATGTGCGTTCGAAAGGAAGGAAGTTCGAGAGGGCTAGAGGAAGAAGAAACAGTCGAGGATTTAGGGTTTAG 564 0.4716 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTESKFNAVILKRLFMSKVNKPPMSLSRLISFMKGKEDKIAVIVGNVTDDVRVYDVPPLKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNGREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGRRNSRGFRV* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02038 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 187 IPR000039 GO:0003735|GO:0005840|GO:0006412
Pte18g02038 187 FunFam 60S ribosomal protein L18 1 187 - -
Pte18g02038 187 MobiDBLite consensus disorder prediction 151 187 - -
Pte18g02038 187 Gene3D - 1 187 - -
Pte18g02038 187 MobiDBLite consensus disorder prediction 164 187 - -
Pte18g02038 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Pte18g02038 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02038 Pte-Chr18 30685832 30687988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02038 3 188 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 80.214 3.90e-105 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02038 K02883 - pop:7487794 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g02038 18 30685832 30687988 Pte18g02038 18 30685832 30687988 RCT