Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02037 GCGTGCATCAGGAATGTAGAAGCTGAGCTTGACGAAGTTGGCTCTCCACACCCAACTTCAGTTTTTAATGCAGCACTTAGGGCCACACTCAATGAAGCAAGAGCTGCTGTTCAATCCATTGCCAATGTTAACGCATTGTCCGTGAGTTATCGTGAACAAATAGCAATAGAAGATTGCAAGGAGCTCTTGGATTTCTCTGTTTCTGAATTGGCTTGGTCTTTAGACGAGATGAAGAGAATCAGAACTGGTTCTAGGAGCATTAGCTATGAAGGAAACCTCAAAGCCTGGCTAAGCGCTGCACTAAGTAACCAAGACACATGTCTTGAAGGCTTTGAAGGCACTGAAGGACATTTCGAAAGTTACATGAGGGGAAGCTTGAAACAAGTTACACAACTTATCAGCAATGTTCTGGGGTTATATGTCCAATTGCATAGCTTGCCCTTTAAGCCCCAAAGAAATAATACACGAACAATCCGAAGTTCAGAGTTCCCCAAGTGGATGACTCAAGGTGATCAAGAGCTACTTAAATCTAATATGCGAGGCATGCATGTAGATGCTGTTGTGGCAATGGATGGGAGTGGACATTATCGTACAATTACAGAGGCAGTGAATGCTGCTCCTAGTCATAGCACCAGGAGGTATATCATATACGTGAAAAAGGGTGTGTATCGTGAGAACGTAGACATGAAGAAGAAGAAGACCAATATCATGTTAGTAGGTGATGGAATTGGCGCTACAGTGGTCACAGGCAATAGAAATTTCATGCAGGGATGGACGACATTTCGAACACCCACCGTTGCTGTGTCGGGAAAAGGTTTCATAGCTAGGGATATGACATTTAGGAACACTGCCGGACCTGAGAACCATCAAGCTGTGGCACTCAGAGTGGACTCCGACCAGTCTGCGTTTTACAGGTGCAGCATGGAGAGCCATCAAGATACCCTTTATGCTCACTCACTCCGCCAATTTTATCGAGAATGCAACATCTACGGCACCATAGATTTCATATTCGGAAATGGCGCAGCTGTGCTTCAAAATTGCAAAATTTACACACGCGTCCCGCTTCCTTTACAAAAAGTCACCATTACTGCCCAAGGCAGGAAAAGTCCCAATCAAAACACTGGGTTTTCAATCCAAGATAGCTACATTTTCGCTACTCAGCCTACCTACTTAGGGAGGCCGTGGAAGCCATACTCGAGGACAGTGTATATGAACACGTACATGAGTGGTCTGGTCCAACCCAGAGGGTGGCTTGAGTGGTATGGAAACTTTGCCTTGAGCACATTGTGGTATGGTGAGTACAGAAACTATGGACCGGGTGCATCATTTTCTGGGAGGGTGAAATGGCCGGGTTATCACATCATTCAAGACGGTGCTACTGCTAGTTACTTTACAGTGGGGCGATTCATTGATGGAATGGCATGGTTGCCAGCAACGGGTGTCAAATTCACTGCAGGTTTAAGCTCT 1467 0.4554 ACIRNVEAELDEVGSPHPTSVFNAALRATLNEARAAVQSIANVNALSVSYREQIAIEDCKELLDFSVSELAWSLDEMKRIRTGSRSISYEGNLKAWLSAALSNQDTCLEGFEGTEGHFESYMRGSLKQVTQLISNVLGLYVQLHSLPFKPQRNNTRTIRSSEFPKWMTQGDQELLKSNMRGMHVDAVVAMDGSGHYRTITEAVNAAPSHSTRRYIIYVKKGVYRENVDMKKKKTNIMLVGDGIGATVVTGNRNFMQGWTTFRTPTVAVSGKGFIARDMTFRNTAGPENHQAVALRVDSDQSAFYRCSMESHQDTLYAHSLRQFYRECNIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPNQNTGFSIQDSYIFATQPTYLGRPWKPYSRTVYMNTYMSGLVQPRGWLEWYGNFALSTLWYGEYRNYGPGASFSGRVKWPGYHIIQDGATASYFTVGRFIDGMAWLPATGVKFTAGLSS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02037 489 Pfam Plant invertase/pectin methylesterase inhibitor 18 138 IPR006501 GO:0004857
Pte18g02037 489 Pfam Pectinesterase 185 472 IPR000070 GO:0030599|GO:0042545
Pte18g02037 489 SMART PMEI_2 5 139 IPR006501 GO:0004857
Pte18g02037 489 CDD PMEI-like_4 18 143 - -
Pte18g02037 489 NCBIfam pectinesterase inhibitor domain 12 144 IPR006501 GO:0004857
Pte18g02037 489 SUPERFAMILY Pectin lyase-like 183 486 IPR011050 -
Pte18g02037 489 ProSitePatterns Pectinesterase signature 1. 210 229 IPR018040 -
Pte18g02037 489 Gene3D - 180 487 IPR012334 -
Pte18g02037 489 FunFam Pectinesterase 179 487 - -
Pte18g02037 489 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 17 140 IPR035513 -
Pte18g02037 489 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 143 IPR035513 -
Pte18g02037 489 ProSitePatterns Pectinesterase signature 2. 329 338 IPR033131 -
Pte18g02037 489 PANTHER PECTINESTERASE 14 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02037 Pte-Chr18 30680084 30681636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02037 2 489 Carbohydrate Esterase AT3G05620 68.136 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02037 K01051 - qsu:111996745 846.269