Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02033 ATGTCTTCAGAGCGGTTGATTTCACAATCCGAGAATGATCCCACTTCAGCTACTGCTCCATTATCTGCTGCTCGCTCCTCCAAGCAATGCGGTGATGCCACATGGATTTTCGATGAACTTCCAACTGCAACAATCGTGTCTGTTTCTAGGCCTGAGACAGGAAATATCAGCCCAATACTTTTGTCATACACTATCGAGTTTCACTATAAGCAGTTCAAATGGCATTTGCAGAAGAAAGCATCACAAGTTCTAAATTTGCACATTTCCTTGAAGAAGCGTGCAATCATTGAAGAATTTTATGAGAAACAAGAGCAGGTAAAAGAGTGGCTTCATAGCGTAGGAATAGTAGATCAGACAACTGTTGTGCAGGATGACGATGAACCTGATGATGGAATTGTCCCACATCATGAAGCAAGTGCTAGAAACAGATATGTTCCATCTGCTGCTGCTTTACCAATCATTCGTCCATCACTTGGTGGTCAGCAGGCTATTGCAGACAGAGCAAAGACTGCGATGCAGGGTTATCTAAATCACTTCTTGGGAAACATGGATATTGTAAACTCTCGAGAGGTCTGTAAATTTTTGGAGGTTTCCAGATTATCTTTCCTACAGGAGTATGGGCCAAAGTTGAGAGAAGGTTATGTAATGGTGAAGGATCTATCTAAGTCTTCCAAGGGTAATGCCGATATCAAATGCTTTGCCTGCGATTGCTTTGGTTGTTGCAAAAACAACTGGAAAAAGGTTTGGGCTGTACTTAAACCTGGGTTTCTGGCATTTCTGGATGATCCTTTTGGGGGCAAATTGTTGGACATTATTGTTTTTGATACCATCCCAACTGCAAATGGAAATGGATTGTCCCAAGCGCATTTACTAGCTGATCATGTAAAGGAACGCAATCCGTTACGATATACGTTTAAGGTTTCCAGTGGAAATGGAAGCATAAGATTAAGAACCACCAGCAGTGCTAAAATAAAAGAATGGGTCAATGCAATCAACGATGTTGGTCTAAGACCTCATGATGGTTGGTGTCGTCTTCATCGATTTAGTTCATTTGCGCCACCTAGAGGTGTCGTAGATGACGGGAGTCAAGCCCAATGGTTTCTTGATGGCCGAGAAGCATTTAAAGCTATTGCTGCTTCAATACAAGCTGCAAAGTCAGAGATATTCATTACTGGTTGGTGGCTCTGCCCAGAACTATATCTGAGACGGCCTTTTCATAGTCATTCTTCCTATAGGCTCGATGCATTACTAGAAAAAAAGGCAAAACAAGGAGTTCAGATTTACATTCTGTTATACAAGGAGGTTCCTATTGCTTTAAAAATCAATAGCCAGTACAGTCAGAAAAGGCTCTCCAACATTCATGAAAACGTGAGGGTATTGCGCTCTCCGGATCATTTTGCCAGCGGTGTTTATTTATGGTCACACCATGAAAAACTCGTTATTGTGGATTACCAGATTTGCTACCTTGGAGGTTTAGATTTATGCTTTGGACGTTATGACACACCTGATCACAGACTAGATGATTACCCCTGTCTTATATGGCCTGGAAAAGACTACTATAATCCAAGGGAATCAGAGCCAAATTCCTGGGAAGACACGATGAGAGATGAACTGGATCGTCAAAAATATCCACGCATGCCATGGCATGATGTCCATTGTGCAGTTTTAGGCCCTTCCTGCAGAGACATTGCTCGTCATTTTGTTCAGCGCTGGAACCATGCTAAGAGAGCCAAAGCACCAAATGAACACACGATTCCATTGCTTATACCGCACCACCACATGGTGCTTCCTCATTATATGGGGACAAGCAAAGAAATAGACATTGGAAGAAAGTGTGAAGAAGACGACCAAAAAGATAAAGAAAGGCAAGATTCGTTGTCCTCAATATCACCATCGGTGGATTTTCCATTGCTTTTGCCTCAAGAAGCTGGTGTATTACGCGCTCCAAATGGTGATCGAAGTAGTAGAGTTTATGAAAGCCTTCCACATCACTCTAAAGTTCCGAAAAATGAGGCATCTGGAGATTACCTCCTTCTTGTTGATGTCAGAAATGGATTAGATGCATCAGCGGTAAAAATTTATGAGAAAGAATCAGAAGGGCGGAGTGAAATTCCAGATGAAGATAACTACGGTACGGCTGGAGTGGGTTATGAGGAAGTTGGTCCACGTGTTGCATGTTGCTGTCAGGTTATTAGAAGTGTAAGCCAGTGGTCAGCAGGAACAAGCCAGACTGAAGAAAGCATTCACGGGGCTTATTGTTCGCTAATTGAGAAAGCAGAACATTTTGTCTATATTGAGAATCAATTTTTTATATCCGGACTCGCGGAGGATGAAATTATACAGAACCGTGTCCTGCAAGCATTATATAAGAGAATACTCAAAGCACATGATGAACAGAAGCTTTTCAGAGGTGGTCTAGATGATGGTGGTGCCGCTACTGTCAGAGCTATAACGCATTGGCAATACCGTACCATTTCCAGGGGGGGAAATTCTATATTACATAATCTTCGGACTCTGCTCGGACCAAAAACAAATGACTATATTTCCTTTTATGGTCTACGATCTTATGGAAGACTTTATCAAGGTGGCCCTGTGGCTACAAGCCAGGTGTATGTCCACAGCAAGTTGATGATAATAGATGACCGTATTGCCGTAATTGGATCTTCAAACATCAATGATAGAAGTTTGCTTGGATCAAGAGACTCTGAGATTGGAGTAGTTATTGAAGATAGAGAGTTTCTTGAATCATCGATGGATGGTAAGCCGTGGAAGGCAGGGAAATTTTCTTATAGCCTTCGATGCTCCTTATGGGCTGAGCACCTTGGTCTACACTCTGGAGAGATGATTCGCATCAGTGATCCTCTATCAGAAGCTGCTTACAGAGGTTTGTGGTTATCGACTGCAAAGGAAAATACTAGAATTTTCGAAGAAGTCTTTGCATGCATTCCGAATGATCAAGTAAAGTCAAGAGGTGCACTTAGACAAACCATGAATCGGTGGAAAGAGAAACTTGGTCAGACCACCATAGACTTAGGAATAGCGCCTCAAAAGTTAGAATCTTTTGAGGATGGAGAGGTAAAGCAAACCGAACCAATGGATAGATTGAAATCTGTTAGGGGACACCTTGTTCTATTTCCTTTGGAGTTCATGTGCCAAGAAGATCTTAGACCGGGTTTCATTGAGAGCGAGTTTTATGTATCTCCTCAAGTTTATCATTGA 3219 0.4209 MSSERLISQSENDPTSATAPLSAARSSKQCGDATWIFDELPTATIVSVSRPETGNISPILLSYTIEFHYKQFKWHLQKKASQVLNLHISLKKRAIIEEFYEKQEQVKEWLHSVGIVDQTTVVQDDDEPDDGIVPHHEASARNRYVPSAAALPIIRPSLGGQQAIADRAKTAMQGYLNHFLGNMDIVNSREVCKFLEVSRLSFLQEYGPKLREGYVMVKDLSKSSKGNADIKCFACDCFGCCKNNWKKVWAVLKPGFLAFLDDPFGGKLLDIIVFDTIPTANGNGLSQAHLLADHVKERNPLRYTFKVSSGNGSIRLRTTSSAKIKEWVNAINDVGLRPHDGWCRLHRFSSFAPPRGVVDDGSQAQWFLDGREAFKAIAASIQAAKSEIFITGWWLCPELYLRRPFHSHSSYRLDALLEKKAKQGVQIYILLYKEVPIALKINSQYSQKRLSNIHENVRVLRSPDHFASGVYLWSHHEKLVIVDYQICYLGGLDLCFGRYDTPDHRLDDYPCLIWPGKDYYNPRESEPNSWEDTMRDELDRQKYPRMPWHDVHCAVLGPSCRDIARHFVQRWNHAKRAKAPNEHTIPLLIPHHHMVLPHYMGTSKEIDIGRKCEEDDQKDKERQDSLSSISPSVDFPLLLPQEAGVLRAPNGDRSSRVYESLPHHSKVPKNEASGDYLLLVDVRNGLDASAVKIYEKESEGRSEIPDEDNYGTAGVGYEEVGPRVACCCQVIRSVSQWSAGTSQTEESIHGAYCSLIEKAEHFVYIENQFFISGLAEDEIIQNRVLQALYKRILKAHDEQKLFRGGLDDGGAATVRAITHWQYRTISRGGNSILHNLRTLLGPKTNDYISFYGLRSYGRLYQGGPVATSQVYVHSKLMIIDDRIAVIGSSNINDRSLLGSRDSEIGVVIEDREFLESSMDGKPWKAGKFSYSLRCSLWAEHLGLHSGEMIRISDPLSEAAYRGLWLSTAKENTRIFEEVFACIPNDQVKSRGALRQTMNRWKEKLGQTTIDLGIAPQKLESFEDGEVKQTEPMDRLKSVRGHLVLFPLEFMCQEDLRPGFIESEFYVSPQVYH* 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02033 1072 Pfam Phospholipase D Active site motif 471 498 IPR001736 GO:0003824
Pte18g02033 1072 Gene3D Endonuclease Chain A 358 591 - -
Pte18g02033 1072 SMART PH_update 209 338 IPR001849 -
Pte18g02033 1072 CDD PH_PLD 186 334 - -
Pte18g02033 1072 SUPERFAMILY Phospholipase D/nuclease 336 591 - -
Pte18g02033 1072 PANTHER PHOSPHOLIPASE D 169 1051 IPR015679 -
Pte18g02033 1072 CDD PLDc_vPLD1_2_yPLD_like_2 740 912 - -
Pte18g02033 1072 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 471 498 IPR001736 GO:0003824
Pte18g02033 1072 SUPERFAMILY Phospholipase D/nuclease 742 942 - -
Pte18g02033 1072 SMART pld_4 471 498 IPR001736 GO:0003824
Pte18g02033 1072 SMART pld_4 868 895 IPR001736 GO:0003824
Pte18g02033 1072 PIRSF PLD_euk 8 1072 IPR016555 GO:0004630|GO:0006654|GO:0048017
Pte18g02033 1072 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 868 895 IPR001736 GO:0003824
Pte18g02033 1072 MobiDBLite consensus disorder prediction 613 633 - -
Pte18g02033 1072 Gene3D - 205 337 IPR011993 -
Pte18g02033 1072 ProSiteProfiles PH domain profile. 208 336 IPR001849 -
Pte18g02033 1072 CDD PLDc_vPLD1_2_yPLD_like_1 364 508 - -
Pte18g02033 1072 Pfam PLD-like domain 753 914 IPR025202 -
Pte18g02033 1072 Gene3D Endonuclease Chain A 699 931 - -
Pte18g02033 1072 MobiDBLite consensus disorder prediction 1 23 - -
Pte18g02033 1072 SUPERFAMILY PH domain-like 240 334 - -
Pte18g02033 1072 Pfam PH domain 211 333 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02033 Pte-Chr18 30657269 30665917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02033 36 1073 Phospholipase D Gene Family (Wang group) AT3G05630 63.800 0.0 1355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02033 K01115 - qsa:O6P43_011068 1524.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g02033 18 30657269 30665917 Pte18g02033 18 30657269 30665917 RCT