Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02026 ATGGTCATAGTGGATCGAAAGGAGAAGACATCGGTTACCGAAGAAATGATCGCTCATAACCAGAAGACATGTACGGACTGCAAAACCACAAAGACACCATTATGGAGGGGGGGTCCAGCAGGACCTAAGACACTGTGCAATGCATGCGGGATCAAATACCGGAAGAGAAAGGTACCTCCGGTGAAAGAAGAGGAAAAAATGAGAGATTTGGGCCAAAGTAGTCACAGTGACAGTGCTACCACTTCGTCCGCCTCGTCCAGTACCAGTAGTAAAGCTTCTGTTGAAGGTGACAGTAATTTTAGTTTTTCATCGAAGATAAGGCTGAAAGCCTTGGGCGAAGAATTCTTGTTACAAAGGTCACCACCAATAGTGAAAAGGCAGCGATTTCAGAAGAGGAAATTGGGGGAGGAGGAACAAGCAGCTTTTTGCTTAATGGCTTTGTCTTCTGGCTATGCCTTTGCGTAA 465 0.4581 MVIVDRKEKTSVTEEMIAHNQKTCTDCKTTKTPLWRGGPAGPKTLCNACGIKYRKRKVPPVKEEEKMRDLGQSSHSDSATTSSASSSTSSKASVEGDSNFSFSSKIRLKALGEEFLLQRSPPIVKRQRFQKRKLGEEEQAAFCLMALSSGYAFA* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02026 154 MobiDBLite consensus disorder prediction 57 99 - -
Pte18g02026 154 MobiDBLite consensus disorder prediction 57 72 - -
Pte18g02026 154 PANTHER OS01G0976800 PROTEIN 8 152 - -
Pte18g02026 154 Gene3D - 19 92 IPR013088 GO:0006355|GO:0008270
Pte18g02026 154 MobiDBLite consensus disorder prediction 73 99 - -
Pte18g02026 154 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 20 59 - -
Pte18g02026 154 CDD ZnF_GATA 33 58 IPR000679 GO:0006355|GO:0043565
Pte18g02026 154 SMART GATA_3 18 69 IPR000679 GO:0006355|GO:0043565
Pte18g02026 154 ProSitePatterns GATA-type zinc finger domain. 24 49 IPR000679 GO:0006355|GO:0043565
Pte18g02026 154 ProSiteProfiles GATA-type zinc finger domain profile. 18 54 IPR000679 GO:0006355|GO:0043565
Pte18g02026 154 Pfam GATA zinc finger 24 58 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02026 Pte-Chr18 30617485 30619329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02026 1 155 C2C2-Gata Transcription Factor Family AT5G49300 38.889 8.01e-28 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pte18g02026 GATA 2.5e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02026 - - qsa:O6P43_011056 137.887