Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02009 ATGGCGGAACAAGCGGGTGTTTTTCACAGCTGTAGTAGTTTTAATGATCCGGATACTTTGCCTGTTGTGGTTGATGATCGTGATGATGACGATGATTCTAATCCCAGAAAACGTCGGAAAATTGGCAGCCATATCATACATCATCACCTCAATCCATCTGGTAGCTCCCAGATCCAATGGCGATCCCACAACGAACAGCGGATCTATTCCTCCAAACTGGTCCGAGCTCTTCACTACGTTCTTCGCCGGAATCCCACCAAAACCAACGCCACTCGTTACATACGTGAAGCCGCCGATAGGGTCCTAGCCGCCACTGCTAAGGGAAGGATGCGGTGGAGTCGGGCGATTCTCTCAAACCCACTCGGTCTTAGGTCCAAGTTGCGGATGGTCTATGGGCATAAGAAAGTAAAGAAGGTGATCTGCAATGGCCGGTTGAAGAAGAGGACTGCTTTATCGGAAGAGCTAAAGCGTAGAAGAACAGGATTACCGGCCCTGCAAATAGAAAACAGAATTTGCGTCCTTGGCCGATTGGTTCCCGGTTGCCGGAGAGTCTCTCTTCCGAATCTTCTGGAAGAAGCCACGGATTATATCGCGGCTTTGGAGATGCAAGTTCGAGCTATGACGGCCATCGCCGAGTTACTCGCCGGCGGGGAGTCAACCGATCGGGTCGACCCATCACAGCCACGAGAATACTGA 696 0.5115 MAEQAGVFHSCSSFNDPDTLPVVVDDRDDDDDSNPRKRRKIGSHIIHHHLNPSGSSQIQWRSHNEQRIYSSKLVRALHYVLRRNPTKTNATRYIREAADRVLAATAKGRMRWSRAILSNPLGLRSKLRMVYGHKKVKKVICNGRLKKRTALSEELKRRRTGLPALQIENRICVLGRLVPGCRRVSLPNLLEEATDYIAALEMQVRAMTAIAELLAGGESTDRVDPSQPREY* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02009 231 CDD bHLH_AtIBH1_like 155 211 IPR044549 GO:0006355
Pte18g02009 231 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 62 214 IPR044660 GO:0006355
Pte18g02009 231 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 215 IPR036638 GO:0046983
Pte18g02009 231 MobiDBLite consensus disorder prediction 15 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02009 Pte-Chr18 30507130 30508360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02009 59 207 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 49.367 5.81e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02009 - - qsa:O6P43_007418 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g02009 18 30507130 30508360 Pte18g02009 18 30507130 30508360 RCT
Pte18g02009 18 30507130 30508360 Pte15g00119 15 925731 926432 RCT