Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02008 ATGTCCTGGAGGCAAGACCCAGATTCGGAAGACCAGTATGGTGTCCTTCTTTACTACAAGTACACTCAGATTCCCGACCTGGATGAGCTGGTCTCATTCTATGAGTGCAACTGTAAATCCCTCGACCTTCTCGGTCGAGTTCGACTCGCTGTTCAAGGCGTCAACGTCACTGTCGGAGGGAAACTGTCAGCTTTGGAGAGACATATTGCGGCAGTCAAATCTAATGAATTGTTTGAAGGCACTGACTTCAAGCTTGCAACTTGTAGCCGCCCTATAAACGACAAGGTTGCGGAGGAATGTGGATTCACTTCTCTTTCGGTTCGAGTTGTCAAGGAACTGGTTACTCTTGGTTCTAATCCTCTGTCAAGATCTCCAGAAATTTCTAACGCGGGAAAGCATCTCTCTGCAGCTGAATTTCATTCTGTTATTCGTAGTGCTGGAGAACTTTTAGATGAGGGGATTCCAGTACAGAAGAAAGATCTTGTTTTACTTGATGCCAGGAATATGTACGAGACAAGAATTGGGAAGTTTCATGCACCGAATGTTCCAACTCTAGATCCAAGTATTAGACAGTACAGTGATTTGCCCTCCTGGGTAGAGGACCATGCTGATCAATTGAAAGGAAAGCGCATCCTCATGTATTGCACAGGAGGAATCAGGTGTGAAATGGCATCAGCTTATATAAGGTCAAAAGGTGCTGGTTTTGAGGATGTGTATCAGTTGTATGGAGGAATACAACGATATTTAGAGCAATTTCCAGATGGTGGTTTCTTTGAAGGAAAAAATTTCGTTTTCGATCACCGGATATCTGTTGGAAGTTCAGATGCAAAAATCATAGGTACCTGCCTTAGTTGTGGAACTTCTTTTGAGAATTACAACATGCGTAGCAGATGCTCCCGCTGCAGAATGCTTGTCTTGATCTGTGGTAGTTGCCAGTTGAAGGAAAATGCTACTTATGTTTGTGAGCTATGCCAAAGACAAGGGAAATCTATTCAATCACTGGAGTTGATCGAAACATTTCAATCAAAATCACCACCAGCAGACAAAGTAGGAAGTGTTCTGTCATCTAACAAACTCTCTCATCACATGCTCAGGACTCGTGGTTTCAGGTCTCCTGGACATCTGCGGATCTTGTGCTTGCATGGGTTTCGACAGAATGCTTCCAGCTTTAAGGGAAGAACAAGATCATTGGCCAAGAAACTTAAAAATATTGTCGAGTTTGTTTTCGTTGATGCAACTCATGAGCTGCCATTCGTATACCTGGCTTCTCCTAATTCACAAGTCAATTGTGCATCACCATCATCACATCCTTGTCCACCTCCACCATTGGAGAATTGCCATAGAAGGTTTGCATGGCTTGTAGCTCCGAAATTTGATGCACAAAGTGAAACCCATTGGAAGATGGCAGATACCCCTTTTGACCCGCTTCAATACCAGCAGCAAGCTGATGGGTTTGATAAATCCTTATTATACTTGAAGGCTGTCTTTTCTCGAGATGGACCATTCGATGGAGTCTTGGGATTTTCACAAGGAGCAGCAATGGCAGCTGAAGTCTCTGCCCTGCAAGATAGACTTCAAGGCGAAATGGATTTTAAGTTTGTGATCTTGTGCTCTGGTTTTCCCCTTAAATCTTTGGAGAAAAGGTGTGGACTAATAAAGTGCCCTTCTCTTCACATTTTCGGTAGCGACCATGGTAAAGACAGACAAATCTCAAACCAAGCTAGCAGGGAGCTTGCTAATCTTTATGATAGAAGTTGCTCTGTGATTATTGAACACGATTGCGGTCATATAATACCGACCCGATCACCATATATCGATGACATCAAGGACTTTCTTAAACGTTTCCTCTAA 1851 0.4327 MSWRQDPDSEDQYGVLLYYKYTQIPDLDELVSFYECNCKSLDLLGRVRLAVQGVNVTVGGKLSALERHIAAVKSNELFEGTDFKLATCSRPINDKVAEECGFTSLSVRVVKELVTLGSNPLSRSPEISNAGKHLSAAEFHSVIRSAGELLDEGIPVQKKDLVLLDARNMYETRIGKFHAPNVPTLDPSIRQYSDLPSWVEDHADQLKGKRILMYCTGGIRCEMASAYIRSKGAGFEDVYQLYGGIQRYLEQFPDGGFFEGKNFVFDHRISVGSSDAKIIGTCLSCGTSFENYNMRSRCSRCRMLVLICGSCQLKENATYVCELCQRQGKSIQSLELIETFQSKSPPADKVGSVLSSNKLSHHMLRTRGFRSPGHLRILCLHGFRQNASSFKGRTRSLAKKLKNIVEFVFVDATHELPFVYLASPNSQVNCASPSSHPCPPPPLENCHRRFAWLVAPKFDAQSETHWKMADTPFDPLQYQQQADGFDKSLLYLKAVFSRDGPFDGVLGFSQGAAMAAEVSALQDRLQGEMDFKFVILCSGFPLKSLEKRCGLIKCPSLHIFGSDHGKDRQISNQASRELANLYDRSCSVIIEHDCGHIIPTRSPYIDDIKDFLKRFL* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02008 616 Gene3D - 2 114 - -
Pte18g02008 616 FunFam esterase OVCA2 isoform X6 372 616 - -
Pte18g02008 616 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 7 615 IPR020936 -
Pte18g02008 616 CDD RHOD_YceA 131 250 - -
Pte18g02008 616 SUPERFAMILY FYVE/PHD zinc finger 279 327 IPR011011 -
Pte18g02008 616 SUPERFAMILY alpha/beta-Hydrolases 372 616 IPR029058 -
Pte18g02008 616 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 121 285 - -
Pte18g02008 616 FunFam Rhodanese-like domain-containing protein 6 4 114 - -
Pte18g02008 616 Gene3D - 122 285 IPR036873 -
Pte18g02008 616 Gene3D alpha/beta hydrolase 373 616 IPR029058 -
Pte18g02008 616 Pfam Serine hydrolase (FSH1) 375 607 IPR005645 -
Pte18g02008 616 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 128 271 IPR036873 -
Pte18g02008 616 SMART rhod_4 146 254 IPR001763 -
Pte18g02008 616 ProSiteProfiles Rhodanese domain profile. 157 257 IPR001763 -
Pte18g02008 616 Pfam Rhodanase C-terminal 259 325 IPR022111 -
Pte18g02008 616 Pfam UPF0176 acylphosphatase like domain 14 112 IPR040503 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02008 Pte-Chr18 30495462 30499174 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02008 4 617 Sulfurtransferasese or Rhodanese AT1G09280 62.460 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02008 - - qsa:O6P43_007413 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g02008 18 30495462 30499174 Pte18g02008 18 30495462 30499174 RCT