Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g02001 ATGGCTAGTGATATCATTCCAATATTGGCCATGATTGTAGTGCAAGTCGGATATGCAGGGATGAATATCACATTAAAACTTGCCAAGGAGTCAGGCATGAACCTACTTGTCCTCGTTACTTATAGGCAAATCTTTGGGGCGCTTGCTATTATCCCTTTCGCTTTATGGTTAGAAAGGCCCAGGGTGACAATGGCTATGTTTTTCCAGATCTTTGTCTGCTCCTTAACAGGGGCAACAGGAAACCAGGTCCTATACTTTGTTGGATTGAGAAACTCAACCCCAACTGTAGCATGTGCAATCAACAATGTGCTTCCTGCGATCACATTCATCCTTGTGGCCATCTGCAGGCAAGAATTTGTGGGAATCAAGACCAAGAGAGGGCAAGCTAAGGTGATAGGGACTCTCGTGGGAATTGGTGGAGCACTGGTCTTGTCATTCTACCATGGAAAATCCATTGGATTGGGTGAATAA 471 0.448 MASDIIPILAMIVVQVGYAGMNITLKLAKESGMNLLVLVTYRQIFGALAIIPFALWLERPRVTMAMFFQIFVCSLTGATGNQVLYFVGLRNSTPTVACAINNVLPAITFILVAICRQEFVGIKTKRGQAKVIGTLVGIGGALVLSFYHGKSIGLGE* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g02001 156 PANTHER WAT1-RELATED PROTEIN 7 151 IPR030184 GO:0016020|GO:0022857
Pte18g02001 156 Pfam EamA-like transporter family 6 145 IPR000620 GO:0016020
Pte18g02001 156 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g02001 Pte-Chr18 30460657 30461927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g02001 3 156 Nodulin-like Gene Family AT1G09380 64.331 2.18e-69 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g02001 - - gra:105782783 217.624