Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01993 ATGGTGATGCAATATGCAATTGAAGATGAGGCGAAGACAAGGAGGCAATTGATTAACAACATAGTGGTAATGTCTGTAGCTCTGGTGGTAATCGCAGCGATGAGCGTTGCTGTTGTTGCTGCGGTTGAGAACAATAAGAATGCACCAGCTACCATGTTTCTACAAAAGCTATGCCAGGACACCGAATATGTGAAAGACTGTCTTCAATACCTGAGCAACTGCAAACCACAAGACAAAGTAGCCACGTACTTGAAAGTCACCCTCGAGAAAGCCCTTGAATATATGAAAGATGCAGTGGAGCCTAAGGACAAAAATCTGGATTCCATGACGCCTGTCCAAAGAGCAGCAGTTGCAGATTGCAAGGAAATACTGCTTCCTCTGGCCGTGGAAGAACTCCAACAGTTGATTGGATTGCAAAATTCCACGGATAAGTCTTTGGAGAACAACCATGAGGACTTTCGAACAGGATTAAGTGCTGTCATTTCTTACCAGCAGACATGCCAAGATGGGTTAGCCGCAACGAAGATCCAGAGTGCTTACTTTGAGAACGGTGATAGTACATTGTCAAAACCAATGAAGATGGCAAAGATTACATTGTCCCTAGTCTACGAACAGTCTGAGAATTTAGATAGGAAGAAATATGATAAAACTGACAATCGAAGGTCTTTACTTGGTAATGATGGTGCTGGCAATTCTCAAAGTGCTGGTGATAATGAGGATGTCAACGCTTTTCCGCCATGGTTTAGCTCAGCAGAGAGGAAAATCTTGGAGTCTCAAGGATTTAGCGGTCAGCAACCAGATGTCATCGTGGGGAAAGATGGGAAATCAAGATATACCAAGATAATGGATGCCATCCTTGCTTACCCCAAGGACCTCAACCGTCCGTATGTCATTTATGTTCGGGAAGGAAAATACGAAGAGAGAGTATTTATTAACAGCAACAACACAAACATATACATGTATGGTGATGGACCTGACAAGACCATCGTATCTGGGTTGGTGTCAGCTAAAGCCGACGAGATTACAACCTTCAAAATGTCTACTTTCACTGTGATTGGCAGAGGATTTTTCTGCAAGGATATGGGATTCGCTGTCCCTAAGGGATATGAAGCTGGAGCACCACTCCATGTCCATTCTGACAAGTCAGCATTCTTCAATTGCAAGATAACCGGCAAGACAACCAGCTTGTTTGCCGTGGCACATCGTCAATTCTACAGAAACTGCGAATTCATCGGTGACGCGCCTGTCCTTAAGGGTGATTCTGCGGCAGTAATACAGAATTCCAAAATCTCCTTGTTGCCTCCCGCACAGGAGAATGTAGTAAGTGAACAATTAAGGTCAGACAAGCGAGAAAACACAGGGTTTGTCATCCACAACTGCAGCATCGACATCATGAACAACATGCAAAAGTCGAACCAATATTCAATATGTTTGGGCAGACCACAGACAAATAACTCAAGAACGGTTGTGTTGGAATCTTACCTGAGTAATACTATCAAGCCAGAAGGATGGTGCAAAGGGATAGCTGATCCATCCCCTATGTTACTTGAATACAACAACAAAGGGCCTGGAGCTTCCACTGACAAGAGGGTAAGCTGGTCCCGCGTCATGGGAAAAGATGAAGCTCAAACATATACGCCGGCTCAGTTCATTGAAGGGGATAGCTGGTTGAAGAATCCAAGTATAGAGTACAACCCGAGGCTTCTATCTTGA 1713 0.4419 MVMQYAIEDEAKTRRQLINNIVVMSVALVVIAAMSVAVVAAVENNKNAPATMFLQKLCQDTEYVKDCLQYLSNCKPQDKVATYLKVTLEKALEYMKDAVEPKDKNLDSMTPVQRAAVADCKEILLPLAVEELQQLIGLQNSTDKSLENNHEDFRTGLSAVISYQQTCQDGLAATKIQSAYFENGDSTLSKPMKMAKITLSLVYEQSENLDRKKYDKTDNRRSLLGNDGAGNSQSAGDNEDVNAFPPWFSSAERKILESQGFSGQQPDVIVGKDGKSRYTKIMDAILAYPKDLNRPYVIYVREGKYEERVFINSNNTNIYMYGDGPDKTIVSGLVSAKADEITTFKMSTFTVIGRGFFCKDMGFAVPKGYEAGAPLHVHSDKSAFFNCKITGKTTSLFAVAHRQFYRNCEFIGDAPVLKGDSAAVIQNSKISLLPPAQENVVSEQLRSDKRENTGFVIHNCSIDIMNNMQKSNQYSICLGRPQTNNSRTVVLESYLSNTIKPEGWCKGIADPSPMLLEYNNKGPGASTDKRVSWSRVMGKDEAQTYTPAQFIEGDSWLKNPSIEYNPRLLS* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01993 570 MobiDBLite consensus disorder prediction 224 239 - -
Pte18g01993 570 Gene3D Invertase/pectin methylesterase inhibitor family protein 50 204 IPR035513 -
Pte18g01993 570 NCBIfam pectinesterase inhibitor domain 24 200 IPR006501 GO:0004857
Pte18g01993 570 Pfam Plant invertase/pectin methylesterase inhibitor 53 187 IPR006501 GO:0004857
Pte18g01993 570 Gene3D - 261 568 IPR012334 -
Pte18g01993 570 MobiDBLite consensus disorder prediction 212 242 - -
Pte18g01993 570 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 194 IPR035513 -
Pte18g01993 570 CDD PMEI-like_3 57 202 - -
Pte18g01993 570 SUPERFAMILY Pectin lyase-like 264 560 IPR011050 -
Pte18g01993 570 Pfam Pectinesterase 267 554 IPR000070 GO:0030599|GO:0042545
Pte18g01993 570 SMART PMEI_2 49 201 IPR006501 GO:0004857
Pte18g01993 570 PANTHER PECTINESTERASE 31 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01993 Pte-Chr18 30409600 30411542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01993 37 557 Carbohydrate Esterase AT2G26450 34.201 4.57e-83 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01993 K01051 - jre:108981763 325.865