Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01986 ATGGTGAACTTTCTGTGGGTTGCTGTTGCTATAGGGCTTGTATGTACCAACTGGGTTAATGGTTCTGTAGAATTTAATTTCAATGAAACAGAAATGACATTGCTGGAGGCTCAGCAAGCATCCGCTGCTGTTAGTAATGCCCTTATGGTGGGACTTACTCTTATCCAAGCTGCTGGTGCCAAAGGAGCAGTTTGCTTGGATGGAACATTACCTGGGTATCACTTGCATCGTGGATATGGGTCGGGAGCAAATAGCTGGCTTATTCAATTGGAGGGAGGTGGATGGTGTAATAACATCAGAAATTGTGTCTACCGAAAAACAACTAGGCGTGGATCATCGTCCTATATGGAAAAGCAGTTAGTTTTTACAGGAATACTTAGTAATAAGGTTGAACAAAATCCAGATTTTTATAATTGGAACAGGATAAAGCTTCGCTATTGTGACGGTGCTTCGTTTACTGGGGACAATGAAAATAAGGCTGCCGGACTGCAATTTAGAGGACAGCGAATATGGCAGGCTGCAATGGAAGAATTGATGTCAAAGGGAATGCGCTTCGCCAAGCAGGCTCTTCTGTCTGGATGCTCTGCTGGGGGTCTGGCATCTATTTTACATTGCGATGAATTCCGTGACCTTTTCCCAACGACTACAAAAGTGAAATGCCTCAGTGATGCTGGGCTATTTCTTGATGCGGTTGATGTATCAGGTGGGCGTACACTCAGAAATTTTTTTGGAGGTGTTGTAGGATTACAGGGAGTGCGAAAGAATCTGCCTCGTTTCTGTACAAGCCACATGGACCCTACTTCGTGCTTCTTCCCCCAGAACTTGATTGCAAACGTTCGGACCCCACTGTTTATTCTCAATGCAGCATATGATGCGTGGCAGATCCAATCAAGCTTAGCTCCACCTTCAGCAGATCCTCATGGTAATTGGCATGACTGCAGATTAAATCATCAGAAATGTTCTGCGTCCCAGATCCAATTTCTGCAAGGTTTCAGGAACCATATGATAAATGCAATCAAGGTCTTCTCAAGATCAAATCAAAATGGGTTATTTATAAATTCATGTTTTGCTCACTGTCAAAGTGAGAGGCAGGATACATGGTTTGCTGACAATTCTCCTACCATCAGGAAAAAGCCAATTGCTCTAGCCGTCGGGAATTGGTATTTTGATCGAGCCGGTGCCAAGGCCATCGACTGTCAATATCCTTGCGACAACACATGCCATAATCTGATTTTTAGCTGA 1242 0.4388 MVNFLWVAVAIGLVCTNWVNGSVEFNFNETEMTLLEAQQASAAVSNALMVGLTLIQAAGAKGAVCLDGTLPGYHLHRGYGSGANSWLIQLEGGGWCNNIRNCVYRKTTRRGSSSYMEKQLVFTGILSNKVEQNPDFYNWNRIKLRYCDGASFTGDNENKAAGLQFRGQRIWQAAMEELMSKGMRFAKQALLSGCSAGGLASILHCDEFRDLFPTTTKVKCLSDAGLFLDAVDVSGGRTLRNFFGGVVGLQGVRKNLPRFCTSHMDPTSCFFPQNLIANVRTPLFILNAAYDAWQIQSSLAPPSADPHGNWHDCRLNHQKCSASQIQFLQGFRNHMINAIKVFSRSNQNGLFINSCFAHCQSERQDTWFADNSPTIRKKPIALAVGNWYFDRAGAKAIDCQYPCDNTCHNLIFS* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01986 413 PANTHER NOTUM-RELATED 41 409 IPR004963 GO:0016787
Pte18g01986 413 Pfam Pectinacetylesterase 45 392 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01986 Pte-Chr18 30358043 30361832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01986 27 412 Carbohydrate Esterase AT1G57590 71.503 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01986 K19882 - qsa:O6P43_007364 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01986 18 30358043 30361832 Pte18g01986 18 30358043 30361832 RCT
Pte18g01986 18 30358043 30361832 Pte18g01971 18 30251699 30255841 RCT
Pte18g01986 18 30358043 30361832 Pte15g00149 15 1081267 1085937 RCT
Pte18g01971 18 30251699 30255841 Pte18g01986 18 30358043 30361832 RCT
Pte15g00149 15 1081267 1085937 Pte18g01986 18 30358043 30361832 RCT
Pte3g00617 3 4848075 4852036 Pte18g01986 18 30358043 30361832 RCT