Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01973 ATGGCCTCTGCCTCATCCATGCAATTGGTTCATACTTACAGCTTCAGACCGCTTGTTCCTCTCTGTCCTTTTCAGAGTGGTTGTAGTCAACACCCATCGCAGGTTTTCAGGCTAAAAGTGGGTAATCATAGTACTGGACGACAGCCTGGTCATTATCGGCCTGCGAATTTGGGAACACAAGCGAAAGCAGTAAAATCAGTGTCTAACTTTTGCTCAACTTTTCGTACCATACAACATTGTAAAAAAACCGCCGACAAGCACAGAAGATTGACCTGCATTCATGCTCTGGCAAAGGATCTAGAGCTGCAAGCAGAAGTGACGACCAAGTGTTTCTTTGATGTAGAAGTTGGGGGTGAACCAGTAGGCAGAATCGTAATCGGTCTCTTTGGAAACGTTGTTCCTAGAACGGCAGAAAATTTCCGTGCTCTGTGCACAGGAGAAAAAGGATATGGTTACAAAGGGTGCTCATTCCATCGTGTAATTAAAGATTTCATGATCCAGGGAGGAGACTTCACCGAAGGAAATGGAACTGGAGGGAAGAGTATCTATGGTTCTAAGTTTGCAGACGAGAACTTTGCCTTGAAACACGTTGGTGCTGGAGTTTTGAGCATGGCAAATGCAGGTCCGGACACCAATGGGAGCCAGTTCTTCATTTGCACAGTAAAGACTCCATGGTTGGACAAGCGTCATGTTGTGTTTGGCCATGTTATCGATGGCATGGATGTTGTTCGAATTCTTGAGTCGCAAGAGACGAGCAGAACTGATTGTCCCCGGAAGCCATGCAGAATTGTTAATTGTGGAGAGCTACCCTTGGAGAGCTGA 822 0.4599 MASASSMQLVHTYSFRPLVPLCPFQSGCSQHPSQVFRLKVGNHSTGRQPGHYRPANLGTQAKAVKSVSNFCSTFRTIQHCKKTADKHRRLTCIHALAKDLELQAEVTTKCFFDVEVGGEPVGRIVIGLFGNVVPRTAENFRALCTGEKGYGYKGCSFHRVIKDFMIQGGDFTEGNGTGGKSIYGSKFADENFALKHVGAGVLSMANAGPDTNGSQFFICTVKTPWLDKRHVVFGHVIDGMDVVRILESQETSRTDCPRKPCRIVNCGELPLES* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01973 273 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 109 269 - -
Pte18g01973 273 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 112 267 IPR002130 GO:0000413|GO:0003755
Pte18g01973 273 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 128 143 IPR002130 GO:0000413|GO:0003755
Pte18g01973 273 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 228 243 IPR002130 GO:0000413|GO:0003755
Pte18g01973 273 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 157 169 IPR002130 GO:0000413|GO:0003755
Pte18g01973 273 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 215 227 IPR002130 GO:0000413|GO:0003755
Pte18g01973 273 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 200 215 IPR002130 GO:0000413|GO:0003755
Pte18g01973 273 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 111 268 IPR002130 GO:0000413|GO:0003755
Pte18g01973 273 FunFam Peptidyl-prolyl cis-trans isomerase 97 273 - -
Pte18g01973 273 Gene3D - 95 273 IPR029000 -
Pte18g01973 273 SUPERFAMILY Cyclophilin-like 105 269 IPR029000 -
Pte18g01973 273 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 152 169 IPR020892 GO:0003755|GO:0006457
Pte18g01973 273 CDD cyclophilin_ABH_like 109 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01973 Pte-Chr18 30264857 30267697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01973 122 266 U-box Gene Family AT5G67530 45.890 1.71e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01973 K03768 - qsa:O6P43_007341 367.466