Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01957 ATGACAGTCTCTGTTATGAGATTGAAACGAAGCCTGGTTACCCCAGCTCAAGAAACACCATCCATCACACTCGACCTCTCAGTCATGGACAAAATTCCTGTATTGAGATGCGACGCACGGACGCTGCATGTGTTCAGACATGGCCCCGAAGCAGCAGCAGTGATAAGAGATGCTTTGTCTAGGGCATTAGTTCACTATTACCCTCTTGCTGGACGGCTCAAAGACTCTAACCGAGGTTGTCTCCAAGTCGAATGTTCCGGCGATGGTGTATGGTTTGTCGAGGCAGCTGCTGATTGCAACCTTGATCTGGTCAATCACTTCGACGATGTTTCTTCTATCCCCTACGGTATTCTTCTACCTGATCAGATTCCTGAGACTCATCAGAACATAAACCCCCTCGTGAAAATGCAGGTTACTCAGTTTGCTTGTGGTGGTTTTGTCATGGGCCTTATTTTCTGCCATGCTATATGCGATGGCTTAGGTGCTGCACAGTTTCTCAATGCTGTGGGTCAGTTAGCTAGAGGCTTTGATCAACCAAGCATGGCTCCTGTGTGGCATAGGGACTTTTGTCCCACCGATCCATCGCAGCATCAAGCCATTGAAATGCCCAATGTACCACTGCCGATTCCAAACTACCGCCTCGAACATGTGAACGTAGACATTCCAATGGACGATATACTTAAGCTCAAACAGAAGTTTCATGATGTAACTGGAAACATTTGCTCTACATTTGAAATTTTAGCTGCAGGGTTTTGGAGGATGAGAACACGAGCAGTTCATTCCGGTGCTGATACACAAGTGAAGCTAGTATTCTTTGCTAACTGTCGTCACCTAGTGGACCCTCCATTGCCAAAAGGCTTCTATGGAAATTGCTTCTTCCCTGTGACTATCACAAGTACTTGTGATTCACTTGCACAGGCATCCATGGTTGAAGTGGTGAAGCTGATCCAAGAATCCAAGAAGAAACTATCAGGTGAGTTTTGCCTTTACTTGAAGGGTGGCCATGCGAAAGCTGGTGGGGAGGACCCCTTTTCTCCTCCTTTGGACTACACAACACTTTTCATATCTGAATGGGGCAAGCTCGGGTTCAACCAGGTAGACTATCAGTGGGGTCCACCTATCCACGTTGTACCCATACAGGGTTCCAGCATCATACCTGTTGGAATTGTGGGGTCGATGCCTTTGCCAAATAGAGGTGTCCGTTTGATGACATGGTGCGTAGAGGAGGCCCATCGTCAGCATTTCGTGGATCAGATGGAGAAACTGACTATAATATGA 1278 0.471 MTVSVMRLKRSLVTPAQETPSITLDLSVMDKIPVLRCDARTLHVFRHGPEAAAVIRDALSRALVHYYPLAGRLKDSNRGCLQVECSGDGVWFVEAAADCNLDLVNHFDDVSSIPYGILLPDQIPETHQNINPLVKMQVTQFACGGFVMGLIFCHAICDGLGAAQFLNAVGQLARGFDQPSMAPVWHRDFCPTDPSQHQAIEMPNVPLPIPNYRLEHVNVDIPMDDILKLKQKFHDVTGNICSTFEILAAGFWRMRTRAVHSGADTQVKLVFFANCRHLVDPPLPKGFYGNCFFPVTITSTCDSLAQASMVEVVKLIQESKKKLSGEFCLYLKGGHAKAGGEDPFSPPLDYTTLFISEWGKLGFNQVDYQWGPPIHVVPIQGSSIIPVGIVGSMPLPNRGVRLMTWCVEEAHRQHFVDQMEKLTII* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01957 425 SUPERFAMILY CoA-dependent acyltransferases 44 179 - -
Pte18g01957 425 Gene3D - 205 418 IPR023213 -
Pte18g01957 425 PANTHER ACYL TRANSFERASE 4 3 422 - -
Pte18g01957 425 Pfam Transferase family 5 420 - -
Pte18g01957 425 Gene3D - 2 204 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01957 Pte-Chr18 30176235 30177637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01957 11 415 Monolignol Biosynthesis Gene Families AT5G48930 26.941 2.11e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01957 - - qsa:O6P43_010923 660.603