Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01954 ATGGATGAAATGTTGGGAGCCAGGTTCACCATAATGAGTTGCTTCAGTTGTTGTGAAGAAGATCATTTACAAAAAGCAGCTGAGACAGGTGGTCCATACATTACTAAGAATTCTGCAGGAAATGATGGACACTACCAGACCTCTGAAGCCACAACAAAGGGTTCTCAAACAATAAAACCCCAGCCTATTGAAGTGCCAGGCATTTCAGCTGATGAACTGAAGGAAATAACAGACTCTTTTGGAACAAATACTCTGATTGGTGAGGGTTCATATGGAAGAGTATATTATGGGGTTCTTAAAAGTGGACAGGCTGCAGCAATTAAGAAGTTGGATTCTAGCAAACAACCTGACGAAGAATTTTTAGCCCAAGTGTCAATGGTTTCAAGGTTGAAGCATGAGAATTTTGTTCAGTTGCTAGGTTATTGTGTTGATGGAAATTCTCGTGTTTTAGCTTATGAGTTTGCATCCAATGGATCTCTTCATGATATCTTACACGGGAGGAAAGGTGTTAAAGGAGCGCGGCCTGGCCCAGTTCTGACTTGGGCACAAAGAGTCAAAATTGCTGTAGGGGCTGCAAAGGGGCTTGAGTATTTGCATGAGAAGGCCGATCCTCACATCATTCATCGAGATATCAAGTCAAGCAATGTACTACTTTTTGATGATGATGTTGCAAAGATTGCAGACTTTGATTTGTCAAATCAGGCACCTGATATGGCTGCTCGTCTTCACTCTACCCGTGTTCTTGGAACCTTTGGTTATCATGCTCCTGAATATGCAATGACTGGACAACTGAATGCTAAGAGCGATGTATACAGCTTTGGTGTGGTCCTCTTGGAACTACTGACAGGAAGAAAGCCCGTTGATCATACACTTCCACGAGGACAACAAAGTCTAGTTACATGGGCTACCCCAAAACTTAGTGAAGATAAAGTCAGACAGTGCATTGATGCAAGATTAAACGGAGATTACCCACCAAAAGCTGTTGCAAAGCTAGCTGCGGTTGCTGCCTTGTGTGTACAATACGAAGCTGACTTTAGGCCAAATATGAGCATTGTTGTCAAAGCCCTCCAGCCCCTGTTAAATGCGCGACCTGGCCCTGCTGGTGAAGCGACAACCTAA 1119 0.4352 MDEMLGARFTIMSCFSCCEEDHLQKAAETGGPYITKNSAGNDGHYQTSEATTKGSQTIKPQPIEVPGISADELKEITDSFGTNTLIGEGSYGRVYYGVLKSGQAAAIKKLDSSKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGNSRVLAYEFASNGSLHDILHGRKGVKGARPGPVLTWAQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCIDARLNGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQPLLNARPGPAGEATT* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01954 372 ProSiteProfiles Protein kinase domain profile. 80 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01954 372 CDD STKc_IRAK 86 359 - -
Pte18g01954 372 FunFam PTI1-like tyrosine-protein kinase 3 44 154 - -
Pte18g01954 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Pte18g01954 372 Gene3D Phosphorylase Kinase; domain 1 41 154 - -
Pte18g01954 372 SUPERFAMILY Protein kinase-like (PK-like) 56 356 IPR011009 -
Pte18g01954 372 Pfam Protein tyrosine and serine/threonine kinase 84 356 IPR001245 GO:0004672|GO:0006468
Pte18g01954 372 Gene3D Transferase(Phosphotransferase) domain 1 155 364 - -
Pte18g01954 372 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Pte18g01954 372 MobiDBLite consensus disorder prediction 34 59 - -
Pte18g01954 372 SMART serkin_6 80 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01954 372 FunFam pto-interacting protein 1 156 367 - -
Pte18g01954 372 PIRSF ILK 17 363 - -
Pte18g01954 372 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 15 362 - -
Pte18g01954 372 MobiDBLite consensus disorder prediction 33 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01954 Pte-Chr18 30152539 30156599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01954 60 357 Receptor kinase-like Gene Family AT4G02010 50.000 3.36e-92 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pte18g01954 PK_Tyr_Ser-Thr 5.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01954 K13436 - zju:107426175 652.514