Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01953 ATGGCAAATAAGATTGTAGTGTCTGTAGTATCTCTCATTCTCGTAGTAGGTGTCGCCCTAGGTGTTGTTGCTGTCGTTAACTTCACTAACCAAAAGAAATCAGACAGTATATCAGTTTCGAACAAGGCCGTCACTGTCATTTGCTCCAAAACTGATGACTCAAATTTCTGCCAGGACACCATGAAAGATGTCAAAAATCCAGATGATCCAATGGAGTGCATCAAGGCTGCTCTTCAAGTAGGCGTCAATCATTTCCTCGAGGCGGTGAACGTGTCCGGCAGGCTATCTGCTGAGAAGAAAGACATTGGAAGACTCGGAGTGAATTTTGAGGACTGCAAGGATTTGTTGCAATTTGCAGCCGAAGACTTTCAAACTGTCTTGGCGACTGCTCAAGATAACAACGTCAATTCCTTGAGTAACAAGACAGGAGATCTCTTGAATTGGTTGAGCGCTGTCGTGTCTTACCAGCAAACATGTCTCGATAATTTCATGGAAAATCAAGACCCCGCTAAGGATTTGAATTTGGATACTGCAGGCAGGCTTACCAACCTGGCTCTTCAAATCATTGACAGCGTGAGTGATATCCTTTTAGCTTTCGACGTTAAGTTCAACGTGAAACCTGCCTCCCGTCGTCTTTTCTCTCTTGACAACGACGGATATCCGACATGGCTACCTGCCGCTGACCGCAAGCTTCTGAATATGGCTGACATTGGTAAACCCGTTAATCCTGTTCCTGCTGGAAGTGAAATGAAACCCCATGTCACTGTAGCTCAGGATGGCAGCGGCCAGTTCAATACCATCGCTGACGCTCTTAAGGCGTACCCCAAGAATCATCAAGGTAGATTCATCATCTACGTGAAGGCAGGTGTGTACCATGAGTATATCACTATTGACAAGAAATTGAAGAACATATTCATGTATGGCGATGGCCCCACTAAGACCATTGTGACCGGAAACAAGAGCTATGCATCAGGCTATAACACTTGGAAGACTGCAAGTTTCTCCATTGTCGGTGAAGGTTTCATGTGCAAGAACATGGGATTCGAAAACACTGCAGGACCCAACGGACACCAAGCTGTTGCTATTCGCGTACAGTCCAATAAGGCGGTTTTCTTGAACTGTAGATTTCATGGCTACCAAGATACCTTGTACGTTCAGGCTTACTACAATTTCTTCCGCGACTGTGTCATCAGTGGCACGATCGACTTCATCTTCGGCGACGCCACGACAATTATCCAGAACTCATTGATCATGGTGAGGAGGCCCAATGACAATCAACTTAACGCCATCACTGCACATGGAAGAATCTATGAACATGAAAAAACTGCTTTGGTCATCCAGAACTGCACTGTTATCGCAGAAGAGAGACTCATGCCTGATAGGTTCAAGTTGAAGACATTCTTGGGCAGGCCATGGAAGAACGGTTCAAGGACAATCTTCATGGAGTCCGACCTCCCCGACTTCATTCAACCTGAAGGCTGGTCTCCTTGGGCCGGTAATGTTCACCTTGACACCATATATTATGCCGAGTATGCCAACCGGGGACCTGGCGCTGATCTTTCCAGAAGGGTCAACTGGAAGGGGTACCATGTTATCAACAAGGAAGAAGCCCAGAAGTTTACTCTTGCTCCCCTACTCTTTGCCCCTGAGGATTGGATTAAGGATACTGGTGTTCCGTACCACGTTGGTTTCACAACCACAGCCTAA 1707 0.4634 MANKIVVSVVSLILVVGVALGVVAVVNFTNQKKSDSISVSNKAVTVICSKTDDSNFCQDTMKDVKNPDDPMECIKAALQVGVNHFLEAVNVSGRLSAEKKDIGRLGVNFEDCKDLLQFAAEDFQTVLATAQDNNVNSLSNKTGDLLNWLSAVVSYQQTCLDNFMENQDPAKDLNLDTAGRLTNLALQIIDSVSDILLAFDVKFNVKPASRRLFSLDNDGYPTWLPAADRKLLNMADIGKPVNPVPAGSEMKPHVTVAQDGSGQFNTIADALKAYPKNHQGRFIIYVKAGVYHEYITIDKKLKNIFMYGDGPTKTIVTGNKSYASGYNTWKTASFSIVGEGFMCKNMGFENTAGPNGHQAVAIRVQSNKAVFLNCRFHGYQDTLYVQAYYNFFRDCVISGTIDFIFGDATTIIQNSLIMVRRPNDNQLNAITAHGRIYEHEKTALVIQNCTVIAEERLMPDRFKLKTFLGRPWKNGSRTIFMESDLPDFIQPEGWSPWAGNVHLDTIYYAEYANRGPGADLSRRVNWKGYHVINKEEAQKFTLAPLLFAPEDWIKDTGVPYHVGFTTTA* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01953 568 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
Pte18g01953 568 PANTHER PECTINESTERASE 16 554 - -
Pte18g01953 568 CDD PMEI-like_3 47 193 - -
Pte18g01953 568 Pfam Plant invertase/pectin methylesterase inhibitor 44 186 IPR006501 GO:0004857
Pte18g01953 568 SMART PMEI_2 39 188 IPR006501 GO:0004857
Pte18g01953 568 Pfam Pectinesterase 253 546 IPR000070 GO:0030599|GO:0042545
Pte18g01953 568 FunFam Pectinesterase 247 564 - -
Pte18g01953 568 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 192 IPR035513 -
Pte18g01953 568 SUPERFAMILY Pectin lyase-like 249 562 IPR011050 -
Pte18g01953 568 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 189 IPR035513 -
Pte18g01953 568 Gene3D - 246 564 IPR012334 -
Pte18g01953 568 NCBIfam pectinesterase inhibitor domain 22 167 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01953 Pte-Chr18 30144596 30146400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01953 5 564 Carbohydrate Esterase AT3G05610 40.949 8.46e-150 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01953 K01051 - jre:108981763 568.155