Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01950 ATGGATCTATTTAGGAAATGTATGGAGCCTGTGGAGAAATATCTCTATGACTCAAAGATTGACAAGGCTCAGGTCATGAGGTTGTTCTCGTTGGTGGGTCTACAAGGATTCTGCAAAAGCATTAATCCTGATGAAGCTGTGGCATATGGAGCCGCTGTTCAGGCTGCAATTCTCACTGGTGAAGATGCTGAAGGATTAGCTGACAGGGACTGTGGCACTCCACTCGCCACCAATGCAGAAGGATGCCACCGAAAAGAATGGAAACGCTGCTTGACTGATATAAGATAA 288 0.4583 MDLFRKCMEPVEKYLYDSKIDKAQVMRLFSLVGLQGFCKSINPDEAVAYGAAVQAAILTGEDAEGLADRDCGTPLATNAEGCHRKEWKRCLTDIR* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01950 95 Pfam Hsp70 protein 33 67 IPR013126 GO:0005524|GO:0140662
Pte18g01950 95 Gene3D - 7 41 - -
Pte18g01950 95 SUPERFAMILY Actin-like ATPase domain 2 60 IPR043129 -
Pte18g01950 95 Gene3D - 42 56 - -
Pte18g01950 95 PANTHER HEAT SHOCK PROTEIN 70KDA 1 68 IPR013126 GO:0005524|GO:0140662
Pte18g01950 95 FunFam heat shock 70 kDa protein-like 30 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01950 Pte-Chr18 30126616 30127542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01950 1 68 Calmodulin-binding Proteins AT1G16030 58.824 1.75e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01950 K03283 - egr:104450645 77.4109