Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01945 ATGGAAAGTCAGTCTTTCTCTTTGACACCACCATTCTATTTCAATGATATGCAAGCCGGTGGTGACATGATGCAAGAGCAAGTCGACTTCCAAGGTAAGCAAAGTCATTGGTATGAACTGAATCTTTCTGGACAAGCCAACTATTTGTTGACCGAGAATGGGATGACACCATATCAGTTCATACCCCAAAAAAGGCAATGTCACCTGGAGCAATTCCCCATGCAGGTTCAACCTAATCCTGAGGATGATATGATGTATGAGCTTAACTCCAATCTAGATCAATCATTAACAATACCAGTACCAGAACCATTGGACGAAAGCTCAAGACAAGTCAAGAACTTTGGAATGATCATGTCAGATGATCAAATCAGCGAAGCTAACAGGCAGGTTGAAATGGAACCACAAGAACAGGCATCTTCATCAACATCTTTGGAGCTCTTGAGAAATTATGGAAGCTTAGCCGAGAGGTTAAAGGGTCGGAAAACAAACAATTTGAGCAACGATGACGGTGGACAGAAATTTTCTGTTGAAGAAATAGTAAAGATTGCTGCATCAAGGTACATCCAGTTCTGTGCCCAAGGATATGGGGAGGTCTTCTTGCCCGTACACCCTTTCGAGTCTGCCTTTACCGGTCTGTCCGATAAGGATATCAGAGACGTCGAACTTGCTCACTATCTCCTTGCTGCAGCTGAGAAGCTAAGCCATCAACAATTTGACCATGCAAGGCAATTGCTACAGCGTTGTCAATGGGTTGCTTCTCCAAGGGGAAACTCCGTCCAACGAGTTGTCCACTACTTTGTTGAAGCTCTTCAAGAAAGGATTGCGAGGGAGATGAGGGGAGTCACTTTCGTGGGATCCCAAAGAAACGAAGAGCATGAGCTGATTCAATCTATGAGTAGCTCTGTTCTTGCTAAGTGCCATAAACTTGTTCCGTTCAACCAAATCATGCAGTTTGCAGCAATACAAACTATAGTTGAAAGTGTTGCATCCATGACCAAGATTCATATAATTGATCTTGAAATTGGATGTGGGGTTCGTTGGATGGTGTTGATGCAGGCATTAGCAGAACGAGAACAGACTCCTCTTGAAATGTTGAAGATAACTGCTCCGGGTTTAATAGGAAGAGACAAGGTAGAGGAGGCAAAGGAAAGATTGACTTGTGTAGCAGAGTCCCTGAACATACCCTTTTCCTTAAAGGCAGTTATGGTGAGGGACATATCTGAAATCAAGGAAGATATGTTTGAAGTTGAAGAAGGGGAAGGCGTGGCCGTGTACTGTCCTTACATACTCAGGACAATGATTTCAAAGCCATCTACTTTGGACAACCCCATGAGAGTGATAAGGAATCTGAAGCCATCTGTAATGACAGTGCTTGAAGTGGAAGCAAATCATAACTCACCTTCCTTTGTGTCTCGCTTTACTGAAGCATTGTTCCATTATAGTACATATTTTGATGCGCTTGACACTTGCTTCCGAGAGAATGAAGAATGTCAGGCGGCGATTGATCAAATAATGAGTGCTGGGATTCGAAACATTGTGGCAAGGGAAGGCAGCGAAAGAACAGTGAGGAATGTAAAGATCGATGTGTGGAGAGCATTCTTTTCCAGGTTTAGAATGGAGGAAGTTAGATTCAGCGAGTCTTCTTATTACCAAGCTAACTTAGTGATGAAAAGGATTCATTGTGGGAATCACTGCAATATTGAAAGAAATGGCAATGCTTTGATTATTGGGTGGAAGGGAGCTCCAATGTATTCCGTTTCAGCCTGGAAATTTCGTTGA 1779 0.4295 MESQSFSLTPPFYFNDMQAGGDMMQEQVDFQGKQSHWYELNLSGQANYLLTENGMTPYQFIPQKRQCHLEQFPMQVQPNPEDDMMYELNSNLDQSLTIPVPEPLDESSRQVKNFGMIMSDDQISEANRQVEMEPQEQASSSTSLELLRNYGSLAERLKGRKTNNLSNDDGGQKFSVEEIVKIAASRYIQFCAQGYGEVFLPVHPFESAFTGLSDKDIRDVELAHYLLAAAEKLSHQQFDHARQLLQRCQWVASPRGNSVQRVVHYFVEALQERIAREMRGVTFVGSQRNEEHELIQSMSSSVLAKCHKLVPFNQIMQFAAIQTIVESVASMTKIHIIDLEIGCGVRWMVLMQALAEREQTPLEMLKITAPGLIGRDKVEEAKERLTCVAESLNIPFSLKAVMVRDISEIKEDMFEVEEGEGVAVYCPYILRTMISKPSTLDNPMRVIRNLKPSVMTVLEVEANHNSPSFVSRFTEALFHYSTYFDALDTCFRENEECQAAIDQIMSAGIRNIVAREGSERTVRNVKIDVWRAFFSRFRMEEVRFSESSYYQANLVMKRIHCGNHCNIERNGNALIIGWKGAPMYSVSAWKFR* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01945 592 Pfam GRAS domain family 223 590 IPR005202 -
Pte18g01945 592 ProSiteProfiles GRAS family profile. 213 590 IPR005202 -
Pte18g01945 592 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 141 586 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01945 Pte-Chr18 30092634 30094474 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01945 212 591 GRAS Transcription Factor Family AT3G03450 28.721 2.92e-55 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte18g01945 GRAS 3.9e-86 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01945 - - qsa:O6P43_010862 567