Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01944 ATGCAAAGTGATTTGTTCTCTTTCACACCCTTCGGTTTCATAGCAAACCAAGGCAGCAATGATTCTCTATCGGACGCCATTCTCCAATGGAGACAAAGTGATTTTTCTGAAACAGAAACACTGAGAGAGGACGACCAATCCTCGACTGAAGAGATTGTGCACGCAATGCATTTGTTCCAGAGCCATCAGCAACACCTCCTGAATGCGCAGATTCATATACTGGACGTGCAGCAGCCACACAAGTACAGACTAATTCAACCACTTGGAGAAAGCGAGTTCCAAAGCCCAAGTCTCGAGCGTATGGAAATGGTAGGATCAGAAATAATCGAATACGAAAATAGATTGGGACCAGTAAAGCTATCGTCTTTTTCATCCTTCGAGCTCCTGCAGACTTACAAAAGTGGATTACAGAAGCTCAAATGGGAAGAAGTAATAAATTCATGCCGTGACACTTCCAGTGGCTACAAGGAGACATCAGTTTTAGATATAATGAGAATAGCTGGATCAAGGTACATAAAATCGTCGTTGGAAGGAAATGAAAATTTCCTGGCGATGAGGCCGATGGATCTATCACCTCTTGCAACTAATCATGCAGGCGATTTTTTAGCTAAACTGGAAGTGGGTGATTTAGAACTTGCTCAGTTTCTCATAGCTGCAGCTGAAAAGGTAAGCCTTAGACAAGTTGATCTCGCAGAAAGTTTACTCTTACGCTTTCAATTGGTGTCACCAACAATAGACAACCCAATACATCGGGTAATTTTCTCGTTTGCTGAAGCACTTCTAAAGAAAATTGAAAATGAGACGAGATGTATAACATTTTTGGGATCTAAGAGCAGTGAAGTGAATGAATTACTCTTGACTTTTAATCTGGAGTTGCTTGCTGCATACCACAACGTTATTCCTCCAAATCAAGTAACGCAGTTCGCAGGGATACAAACAATTTTGGACAACGTTGCATCCAAGAGCAAAATTCATGTAATTGATCTTGATGTTGGCTGTGGAGCTCGCTGGACTGTGTTTATGCAGGCATTGGCTGAGAGAAAGCAGAAGCTTGTGAAGATTCTCAAAATAACCACTATTGCATTAAATGGCAAAACGAGAGCAGCAGAAAATATTGGGAAAAGGTTGTCAAGTGTAGCTGAATCCTTGAACATACCCTTCTCATTTAAAGTAATACGGTTGAGAGAAATGACAGAACTCGAGCAAAACCAATTTGGAATCGAGAAAGGTGAAACAGTCGTTGTTTACTCCGTATATGGACTCAGGACTATGATCCCAACACCTGTTTGGTTGGAGCACTTGATGGGTGTCATAAAAAGTTTGAGACCAGTTATAATGATAGTGCATGAAGCGGAAGTAAATCTGAACTCTACTACATTTGGAAATCGCTTCACCGAGGCACTGTTCTTTTACGGTGCATATTTTGATATGTTTGACATATGCTTCAAACAAAACAAAGAGATCAGGGTGGCATTTGAGGCACTTATGTATGCGTCAATAAGGGACGTGGTTGCGTTGGATGATAGTGGAAGAATAGTGAGGGATGTAAAAATTGATGTTTGGAGGGCATTCTTTACGAGGTATAGGATGGTGGAAGTTGGATTCACCCAATCATCTCTATATCAAGCTAGTTTGGTCGGGAAAAGTTTTTCATATGGTGATTTCTGCACCATTGATAAATGTGGCAGATCTCTACTGGTTGGTTGGAAAGGGACCCCTTTGATTTCCCTTTCAGCTTGGAAGTTTCGGTGA 1752 0.4127 MQSDLFSFTPFGFIANQGSNDSLSDAILQWRQSDFSETETLREDDQSSTEEIVHAMHLFQSHQQHLLNAQIHILDVQQPHKYRLIQPLGESEFQSPSLERMEMVGSEIIEYENRLGPVKLSSFSSFELLQTYKSGLQKLKWEEVINSCRDTSSGYKETSVLDIMRIAGSRYIKSSLEGNENFLAMRPMDLSPLATNHAGDFLAKLEVGDLELAQFLIAAAEKVSLRQVDLAESLLLRFQLVSPTIDNPIHRVIFSFAEALLKKIENETRCITFLGSKSSEVNELLLTFNLELLAAYHNVIPPNQVTQFAGIQTILDNVASKSKIHVIDLDVGCGARWTVFMQALAERKQKLVKILKITTIALNGKTRAAENIGKRLSSVAESLNIPFSFKVIRLREMTELEQNQFGIEKGETVVVYSVYGLRTMIPTPVWLEHLMGVIKSLRPVIMIVHEAEVNLNSTTFGNRFTEALFFYGAYFDMFDICFKQNKEIRVAFEALMYASIRDVVALDDSGRIVRDVKIDVWRAFFTRYRMVEVGFTQSSLYQASLVGKSFSYGDFCTIDKCGRSLLVGWKGTPLISLSAWKFR* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01944 583 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 144 576 IPR005202 -
Pte18g01944 583 ProSiteProfiles GRAS family profile. 203 581 IPR005202 -
Pte18g01944 583 Pfam GRAS domain family 213 581 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01944 Pte-Chr18 30084942 30086693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01944 205 582 GRAS Transcription Factor Family AT5G17490 28.232 1.38e-41 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte18g01944 GRAS 1.1e-71 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01944 - - qsa:O6P43_010862 429.483