Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01936 ATGCCTGACATTGCTGTCTCCGACCTTCTCATGTCAGTGAATCTTCCGCTGTCGCATAGAATTGGAAGGAAACATTTAGTTTCTCTTGGGGCACAGGCACAGGCACAGGCACAGACATTTTCGCCAGCTCAGGCCCCTCGTTTTGGCCCATCAACTGGCAAGAGTCCAAGCAGTTCAAACTATGCAAAACCAATGAGGAGGAGGACTGATTTAACTGTTCCAAATTCTGGCTCCCACAGTATTGCTCCTTCACAGATCATTGCTGGTGCGGTTCCTTCTGGTTTGGCTGAACCACCCTTGTCTCCTACTGTCTCAAATTGTTGCAAAGCAGACATGGTGCTGAAACGTGGAAGTCAGGGTTGCCACTGTGTGTATCCCATAAAGCTAGATCTCCTGCTTCTCAATGTCTCACAAAATCCTAATTGGAATCTTTTTCTGGTGGAGTTTTCTTCACAACTTGGTCTAGGAACTTCCCAAATAGAACTGATCAACTTTTATGTGCTTGGTTTATCAACATTAAATATATCAATGGACATTACGCCACACAAAGGGATTAGTTTCTCCCCTAGTGAGGCCTTTGCAATAAACTCTTCACTTCTTATGCACAAGGTTCAGTTAGATCCTAAATTAGTTGGCGGTTACAGAATTCTGAACATGACCTGGTTTAAGCCTCCTCCCCTTTCTCAGGCTCCAATTATTGCTGCATTACCCACCAAAGTGCCTCCTCAACATTCACCGACCACCACATCATTGAAAGTTACAAAGCAGGGAAGACACTCGAATTTGTTCCTTGCTCTTGTGATCGGTGCTGTTGTGCTACTTATTATCATCATTTTACTTTTCATGCTTTGTTTATGCACGTGGCAAAAGAAGACAGTGGCACCTCCCATTGAAACTGAGAAGCAAAAAACAGGAAATTTACTTGCAGCTGGTGGGTCCCTTCCCCAACCAGCCAGTACCCGATTTATTGCATACGAAGAACTGAGATCAGCAACAAATAACTTTGAATCTGCAAGTATACTTGGAGAAGGTGGGTTTGGTAGGGTGTTCAAGGGTGTCTTGAGTGATGGTACTCCTGTAGCAATTAAGAGGCTTACCAATGGCGGGCAACAAGGGGATAAAGAATTTTTAGTTGAAGTTGAAATGCTCAGTAGGTTGCATCACCGAAATCTTGTAAAGTTAGTCGGTTATTATAGCAATCGCGACTCTTCACAGAATCTGCTTTGCTATGAGCTTGTTGCAAATGGAAGCTTAGAGGCCTGGCTCCATGGTCCTTTGGGAATAAATTGTCCTCTGGACTGGGATACTAGGATGAAGATTGCACTTGATGCTGCAAGAGGACTTGCTTACCTGCATGAGGACTCGCAACCTTGCGTCATACACAGGGATTTCAAAGCGTCCAATATACTGCTGGAGAACAACTTCCATGCTAAAGTTGCTGATTTTGGCCTTGCTAAACAGGCACCCGAAGGCAGAGCAAATTACTTGTCTACTCGTGTAATGGGCACGTTTGGGTACGTAGCTCCAGAGTATGCCATGACAGGACATCTGCTGGTTAAAAGTGACGTGTATAGTTATGGAGTTGTACTCCTTGAGTTGCTGACAGGAAGAAAACCTGTGGATATGTCCCAACCAACTGGACAAGAAAATCTCGTCACATGGGCCAGACCCATTCTCCGAGATAAGGATAGATTAGAAGAATTAGGTGACTCAAGGCTCGGAGGGAAGTACCCAAAGGAGGATTTTGTGCGTGTTTGTACTATTGCAGCAGCTTGTGTCGCCCCTGAAGCAAATCAACGGCCCACAATGGGGGAAGTGGTGCAGTCACTGAAAATGGTGCAACGTGTCGTAGAATATCAGGATCCCACATTGGCCTCTTCCAACACTCGGCCTAACCTCCGGCAGTCATCTACGACGTTCGAGTCTGATGTAACTTCTTCGATGTTCTCTTCAGGGCCTTACTCTGGATTAAGTGCCTTTGACAATGACACCATTTCTCGGACGGCAGTATTCTCTGAAGATCTTCATGAAGGAAGATGA 2040 0.4529 MPDIAVSDLLMSVNLPLSHRIGRKHLVSLGAQAQAQAQTFSPAQAPRFGPSTGKSPSSSNYAKPMRRRTDLTVPNSGSHSIAPSQIIAGAVPSGLAEPPLSPTVSNCCKADMVLKRGSQGCHCVYPIKLDLLLLNVSQNPNWNLFLVEFSSQLGLGTSQIELINFYVLGLSTLNISMDITPHKGISFSPSEAFAINSSLLMHKVQLDPKLVGGYRILNMTWFKPPPLSQAPIIAALPTKVPPQHSPTTTSLKVTKQGRHSNLFLALVIGAVVLLIIIILLFMLCLCTWQKKTVAPPIETEKQKTGNLLAAGGSLPQPASTRFIAYEELRSATNNFESASILGEGGFGRVFKGVLSDGTPVAIKRLTNGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVANGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKDRLEELGDSRLGGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRVVEYQDPTLASSNTRPNLRQSSTTFESDVTSSMFSSGPYSGLSAFDNDTISRTAVFSEDLHEGR* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01936 679 Gene3D Transferase(Phosphotransferase) domain 1 413 629 - -
Pte18g01936 679 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Pte18g01936 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Pte18g01936 679 Pfam Protein tyrosine and serine/threonine kinase 338 610 IPR001245 GO:0004672|GO:0006468
Pte18g01936 679 SUPERFAMILY Protein kinase-like (PK-like) 315 612 IPR011009 -
Pte18g01936 679 ProSiteProfiles Protein kinase domain profile. 335 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01936 679 FunFam Receptor-like serine/threonine-protein kinase ALE2 413 629 - -
Pte18g01936 679 PANTHER OS01G0750732 PROTEIN 103 630 - -
Pte18g01936 679 MobiDBLite consensus disorder prediction 39 80 - -
Pte18g01936 679 CDD STKc_IRAK 341 611 - -
Pte18g01936 679 FunFam Receptor-like serine/threonine-protein kinase ALE2 315 412 - -
Pte18g01936 679 Gene3D Phosphorylase Kinase; domain 1 317 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01936 Pte-Chr18 30037254 30042695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01936 6 680 Receptor kinase-like Gene Family AT4G02010 70.354 0.0 963
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pte18g01936 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01936 - - qsu:112019854 1000.73