Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01934 ATGGCTTCCAAAACTGAAGGGAAGGCTATCGGCATTGACCTCGGTACCACCTACAGTTGTGTGGGTGTGTGGCAGAATGACAGGGTGGAGATCATAGCTAATGATCGGGCGAACAGAACAACTCCTTCCTATGTTGCATTCACTGATACAGAGCATTTAATTGGTGATGCTGCCAAGAACCAGGTCGCCATGAACCCACAGAACACTGTCTTTGATGCCAAGAGGCTCATAGAAGAACGAGAACAAGGGAATAGACATATCAAAATGTCACCGCAAACAATCATTTTATAA 291 0.4536 MASKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDRANRTTPSYVAFTDTEHLIGDAAKNQVAMNPQNTVFDAKRLIEEREQGNRHIKMSPQTIIL* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01934 96 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Pte18g01934 96 Gene3D - 1 93 - -
Pte18g01934 96 PRINTS 70kDa heat shock protein signature 36 48 - -
Pte18g01934 96 PRINTS 70kDa heat shock protein signature 8 21 - -
Pte18g01934 96 PRINTS 70kDa heat shock protein signature 58 66 - -
Pte18g01934 96 PANTHER HEAT SHOCK PROTEIN 70KDA 9 81 IPR013126 GO:0005524|GO:0140662
Pte18g01934 96 SUPERFAMILY Actin-like ATPase domain 8 83 IPR043129 -
Pte18g01934 96 Pfam Hsp70 protein 9 89 IPR013126 GO:0005524|GO:0140662
Pte18g01934 96 FunFam Heat shock cognate 71 kDa protein 4 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01934 Pte-Chr18 30021092 30021751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01934 1 80 Calmodulin-binding Proteins AT3G12580 86.250 2.96e-43 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01934 K03283 - csav:115707966 152.91