Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01929 ATGAGTGCCACTTTTACTTCATCAGCAGATAACTTCGTTGCAAAAGGAATTACATTTGAGGTCCAATATACATTATGGGATGAGAATGGCCGACATTATTTTCATCGGTGTTATATACAAGGTTCAGTAGATTTCATTTTTGGCAATGGCCAATCAAGATATGAGGAATGTGTAATCAACGCAACAGGGTTAAGTATCACAGCACACGCGAGGAATTCACCGGAAGATCCCAGTGGTTGTGTTCAAGAATTGCGTTATAACTGGAAATGGCGTCCACAATGCTTTGCTTGGAAGAGCTTACAGAGCTTATTCCAGAGTAGTCATTGCAGATTCAAAGTTATCAGACGCAGTTTCTCCAAAGGGTTGGTCTTCTTGGAATCAAGCCGGTCATGA 393 0.4122 MSATFTSSADNFVAKGITFEVQYTLWDENGRHYFHRCYIQGSVDFIFGNGQSRYEECVINATGLSITAHARNSPEDPSGCVQELRYNWKWRPQCFAWKSLQSLFQSSHCRFKVIRRSFSKGLVFLESSRS* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01929 130 ProSitePatterns Pectinesterase signature 2. 39 48 IPR033131 -
Pte18g01929 130 Gene3D - 20 112 IPR012334 -
Pte18g01929 130 SUPERFAMILY Pectin lyase-like 2 80 IPR011050 -
Pte18g01929 130 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 21 81 - -
Pte18g01929 130 Pfam Pectinesterase 7 81 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01929 Pte-Chr18 29992442 29993968 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01929 19 79 Carbohydrate Esterase AT5G47500 50.000 6.87e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01929 - - psom:113271872 97.0561