Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01923 ATGCATTTTCTTCAAGGAGCAAGTCAGAAAAGCACTAATATTTCATGGGATGACCATGGAGAAATCAGTATGAGTGCCACTTTTACTTCATCAGCAGATAACTTCGTTGCAAAAGGAATTACATTTGAGGTCCAATATACATTATGGGATGAGAATGGCCGACATTATTTTCATCGGTGTTATATACAAGGTTCAGTAGATTTCATTTTTGGCAATGGCCAATCAAGATATGAGGAATGTGTAATCAACGCAACTGGGTTAAGTATCACAGCACAGGCGAGGAATTCACCGGAAGATCCCAGTGGTTATGTGTTCAAGAATTGCGTTATAACTGGAAATGGCGTCCACAATGCTTTGCTTGGAAGAGCTTACAGAGCTTATTCCAGAGTAGTCATTGCAGATTCAAAGTTATCAGACGCAGTTTCTCCAAAGGGTTGGTCTTCTTGGAATCAAGCCGGTCATGAAGCAAATATTACATACGTGGAGGCAGGGGACTCCGGACCGGGAGCAGACAAGTCAGAGCGTGTCCATTGGCTTAATTTAAGTGAAGAGAAGCTTAGCCAATTCTTGAGCATGTCTTTCATTGACCAAGATGGTTGGATACGGAAGCTGCCAGTAGCAATTCCATAG 630 0.4222 MHFLQGASQKSTNISWDDHGEISMSATFTSSADNFVAKGITFEVQYTLWDENGRHYFHRCYIQGSVDFIFGNGQSRYEECVINATGLSITAQARNSPEDPSGYVFKNCVITGNGVHNALLGRAYRAYSRVVIADSKLSDAVSPKGWSSWNQAGHEANITYVEAGDSGPGADKSERVHWLNLSEEKLSQFLSMSFIDQDGWIRKLPVAIP* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01923 209 ProSitePatterns Pectinesterase signature 2. 62 71 IPR033131 -
Pte18g01923 209 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 4 43 - -
Pte18g01923 209 Gene3D - 43 208 IPR012334 -
Pte18g01923 209 SUPERFAMILY Pectin lyase-like 4 204 IPR011050 -
Pte18g01923 209 Pfam Pectinesterase 45 197 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01923 Pte-Chr18 29948536 29950094 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01923 18 202 Carbohydrate Esterase AT1G05310 40.102 9.01e-43 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01923 - - minc:123216415 225.713