Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01922 ATGAGCGATGCTCCAAAATCCACCCTCGCCTGTGTTGATGTGAAGGATATGCTTGAAAACAATCAAACTTATTGCAACACAGACAAGTTTTTACTGGGCAATATTTTGGTGGCAGAGGCCAACAAGAATCTGCAAAACAAAATGCCGAAAGTAGCAATGCTCAGCAGGGAGAGTACTATAGGATTTCTTCACAAGAGCAAGAGAACTGCAAGGATTTCGGTGACGAGGGGTCGTTTGGAAGGTTGTAGGATCAGACGCAAAAGTGGGATTGAGAGGAAGGTTAGAACTTTGGAAAGGCTTATCCCCAGTAAAACCGGGTCCAGAGGGTTTGAGGGACTCTTCAAAGAGACAGCTGAATATATTTTGTCTTTGCAAGTGAGAGTGAGGGTCATGCAGTTTACGGTTGATTCCTTGACATGCTCCGCTAATGATGATCACTGA 441 0.4444 MSDAPKSTLACVDVKDMLENNQTYCNTDKFLLGNILVAEANKNLQNKMPKVAMLSRESTIGFLHKSKRTARISVTRGRLEGCRIRRKSGIERKVRTLERLIPSKTGSRGFEGLFKETAEYILSLQVRVRVMQFTVDSLTCSANDDH* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01922 146 CDD bHLH_AtIBH1_like 79 133 IPR044549 GO:0006355
Pte18g01922 146 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 67 138 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01922 Pte-Chr18 29938229 29938954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01922 55 139 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 38.462 2.10e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01922 - - jre:109007196 90.5077