Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01921 ATGGAGAAGAAGGTGGAGATTAAGATGGAAGATACTGTTGGTTCCTCATCATTTTTAGATTATGATTCAGAGAACTACACATTTTCCAGCATGTGTGATTACGGTGTGGTTGACAAGAACTCTTTAGGGTTTATTGAGTTACTGGGTATGCAGGACTTTAGTCCTCTGCTTGATTTGCCACAACAACCATCTTTGCCTGCTAAAGATCCATCAGATACTGTCAACAAGTGTTCGGGTGTGCTGATTCAGCAACCCGTGACTCCTAACTGCTCATCAATTTCGTCTGAGTCCAGTGAAGCAAGGAATGATGAACAGACTAAAACTGTGGACCAAGAGGAGGACCAGCCACAAAAGACCAAGAAACAGTTGAAAGCCAAGAAGACAAATCAGAAGAGACAGAGAGAACCTAGATTCGCGTTTATGACAAAGAGCGAGGTTGATCATCTGGAAGATGGGTACAGATGGAGGAAGTACGGTCAAAAAGCTGTGAAAAACAGTCCCTTTCCCAGGAGTTATTATCGTTGCACCAGTGCGTCGTGTAATGTGAAGAAACGTGTGGAGAGATCTTTCAATGATCCAAGCATTGTAGTGACTACGTATGAAGGCCAACATATCCATCCAAGCCCGGTTATGCCTCGCACAAGCCTCACAGGAGCTTCCATTGCGTCAGCGGGAGTCTCCACTGGATACGGAAGCAACGCTTTCGCTTCAGCAATGGCGACTGCAAACCTACCTCATTTCCAGCACCACCATCAACAAACCCCTGTGAGTTCACTGTCATCATTCCCTTACACTGATTCAACCTCGACCAATTGTAATGCTCCCTTTCTTCATCAGAGAAGGCTTTGTAATCAACAGACTACATTGCTTAAAGATCACGGGCTTCTCCAAGACATTGTTCCTTCAAACATGTTTGAAGCAAGAGTAGAAGATGCGTGA 939 0.4473 MEKKVEIKMEDTVGSSSFLDYDSENYTFSSMCDYGVVDKNSLGFIELLGMQDFSPLLDLPQQPSLPAKDPSDTVNKCSGVLIQQPVTPNCSSISSESSEARNDEQTKTVDQEEDQPQKTKKQLKAKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFNDPSIVVTTYEGQHIHPSPVMPRTSLTGASIASAGVSTGYGSNAFASAMATANLPHFQHHHQQTPVSSLSSFPYTDSTSTNCNAPFLHQRRLCNQQTTLLKDHGLLQDIVPSNMFEARVEDA* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01921 312 Coils Coil 95 115 - -
Pte18g01921 312 Gene3D WRKY domain 134 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g01921 312 SUPERFAMILY WRKY DNA-binding domain 141 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g01921 312 Pfam WRKY DNA -binding domain 150 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g01921 312 MobiDBLite consensus disorder prediction 88 136 - -
Pte18g01921 312 MobiDBLite consensus disorder prediction 100 121 - -
Pte18g01921 312 PIRSF WRKY_txn_fact_IIc 1 309 IPR017396 GO:0003700
Pte18g01921 312 ProSiteProfiles WRKY domain profile. 144 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g01921 312 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 83 249 IPR044810 GO:0003700
Pte18g01921 312 SMART WRKY_cls 149 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g01921 312 FunFam WRKY transcription factor 57 135 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01921 Pte-Chr18 29925156 29928285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01921 18 306 WRKY Transcription Factor Family AT2G47260 46.707 1.72e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte18g01921 WRKY 3.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01921 - - aprc:113872234 346.665